RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CNTNAP5Q8WYK1 1306 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 PLIN4Q96Q06 1357 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 BTBD18B2RXH4 712 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 CTAGE5O15320 804 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 WDHD1O75717 1129 aaPredicted RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 CCDC192P0DO97 292 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 CMA1P23946 247 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 CDK8P49336 464 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 HDLBPQ00341 1268 aaKnown RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 MLLT1Q03111 559 aaPredicted RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 FAM160A1Q05DH4 1040 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 GRM4Q14833 912 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 STK38Q15208 465 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 NPY5RQ15761 445 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 DOK7Q18PE1 504 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 STRIP1Q5VSL9 837 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 POTEHQ6S545 545 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 NOSTRINQ8IVI9 506 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 DIS3L2Q8IYB7 885 aaKnown RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 FMR1NBQ8N0W7 255 aaPredicted RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 CMTR1Q8N1G2 835 aaKnown RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 SRBD1Q8N5C6 995 aaKnown RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 SLC44A5Q8NCS7 719 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 CTCFLQ8NI51 663 aaPredicted RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 MRPS27Q92552 414 aaKnown RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 KLRG1Q96E93 195 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 PHF20Q9BVI0 1012 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 TMX4Q9H1E5 349 aaPredicted RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 TNMDQ9H2S6 317 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 ZNF287Q9HBT7 754 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 SAP30BPQ9UHR5 308 aaKnown RBP8□□□□□ -1.13
TRIM55-203ENST00000350034 MRVI1Q9Y6F6 885 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 C10orf71Q711Q0 1435 aa8□□□□□ -1.13
TRIM55-203ENST00000350034 MYH15Q9Y2K3 1946 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 CHRNA5P30532 468 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 KIF5BP33176 963 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 ME1P48163 572 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 GNAQP50148 359 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 TOB1P50616 345 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 TYRO3Q06418 890 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 SAFBQ15424 915 aaKnown RBP eCLIP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 SF3A1Q15459 793 aaKnown RBP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 SLC35G1Q2M3R5 365 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 TPRNQ4KMQ1 711 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 RILPL1Q5EBL4 403 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 DACT2Q5SW24 774 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 APOBEC3HQ6NTF7 200 aaKnown RBP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 CCDC73Q6ZRK6 1079 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 ZNF444Q8N0Y2 327 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 FSIP1Q8NA03 581 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 RNF214Q8ND24 703 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 TNFRSF25Q93038 417 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 ZDHHC15Q96MV8 337 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 MKNK2Q9HBH9 465 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 TAOK2Q9UL54 1235 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 KCNJ14Q9UNX9 436 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 TTF2Q9UNY4 1162 aaKnown RBP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 HPSEQ9Y251 543 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 V9GY48 417 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-203ENST00000350034 MYO3BQ8WXR4 1341 aa7.99□□□□□ -1.13
TRIM55-203ENST00000350034 MYH2Q9UKX2 1941 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 IGKV6D-41A0A0C4DH26 115 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 USP17L3A6NCW0 530 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 USP17L4A6NCW7 530 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 PALM3A6NDB9 673 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-203ENST00000350034 NPM3O75607 178 aaKnown RBP7.98□□□□□ -1.13
TRIM55-203ENST00000350034 TSPY3P0CV98 308 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 TSPY8P0CW00 308 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 SCG2P13521 617 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 XBP1P17861 261 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 SMARCA1P28370 1054 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 AKAP17AQ02040 695 aaKnown RBP7.98□□□□□ -1.13
TRIM55-203ENST00000350034 KIAA2012Q0VF49 1180 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 CAMK4Q16566 473 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 PFKFB3Q16875 520 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-203ENST00000350034 HS1BP3Q53T59 392 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 CDC42EP5Q6NZY7 148 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 USP17L1Q7RTZ2 530 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 FAM177A1Q8N128 213 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-203ENST00000350034 FAM43AQ8N2R8 423 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 CCDC82Q8N4S0 544 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 PNMA1Q8ND90 353 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 SUPT20HQ8NEM7 779 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 FAM200AQ8TCP9 573 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 OXER1Q8TDS5 423 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 SLC16A10Q8TF71 515 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 TEKT1Q969V4 418 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 TIGD1Q96MW7 591 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 TMEM47Q9BQJ4 181 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 MXD3Q9BW11 206 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 KAT14Q9H8E8 782 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 DDX4Q9NQI0 724 aaKnown RBP7.98□□□□□ -1.13
TRIM55-203ENST00000350034 VPS54Q9P1Q0 977 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 ECM29Q5VYK3 1845 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 NAV1Q8NEY1 1877 aa7.98□□□□□ -1.13
TRIM55-203ENST00000350034 SLX4Q8IY92 1834 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 ECE2O60344 883 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 KINO60870 393 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms