RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CLIC6Q96NY7 704 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 NAT10Q9H0A0 1025 aaKnown RBP23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 LTBP1Q14766 1721 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 GOLGA6L6A8MZA4 724 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 NPR1P16066 1061 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 CCDC178Q5BJE1 867 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 PLA2G4DQ86XP0 818 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 SLF2Q8IX21 1173 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 MPNDQ8N594 471 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 SRBD1Q8N5C6 995 aaKnown RBP23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 DYNLL2Q96FJ2 89 aa23.43■■□□□ 1.34
CHRNA3-202ENST00000348639 PLCG2P16885 1265 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 TRIM5Q9C035 493 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 MKNK2Q9HBH9 465 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 IL17RBQ9NRM6 502 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 FAM205AQ6ZU69 1335 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 KRT2P35908 639 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 ZNF75DP51815 510 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 ZRSR1Q15695 479 aaKnown RBP23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 MAPKAPK5Q8IW41 473 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 KAT14Q9H8E8 782 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 CABP5Q9NP86 173 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 TCP11L1Q9NUJ3 509 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 CEP131Q9UPN4 1083 aa23.42■■□□□ 1.34
CHRNA3-202ENST00000348639 NAV1Q8NEY1 1877 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 hCG_1642624A0A1W2PR95 340 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 OFD1O75665 1012 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 PTPREP23469 700 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 KIF5BP33176 963 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 PDE6BP35913 854 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 SARM1Q6SZW1 724 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 DHX40Q8IX18 779 aaKnown RBP23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 FBXW7Q969H0 707 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 ZNF830Q96NB3 372 aaPredicted RBP23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 SAP30BPQ9UHR5 308 aaKnown RBP23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 PCDHB6Q9Y5E3 794 aa23.41■■□□□ 1.34
CHRNA3-202ENST00000348639 A0A087WWV3 80 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 BECN2A8MW95 431 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 GTF2IP78347 998 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 KIAA2012Q0VF49 1180 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 TTC12Q9H892 705 aaPredicted RBP23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 FBXO2Q9UK22 296 aaPredicted RBP23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 MORC2Q9Y6X9 1032 aaPredicted RBP23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 NRXN2Q9P2S2 1712 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 GAKO14976 1311 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 ALDH1B1P30837 517 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 PLCD1P51178 756 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 ZNF444Q8N0Y2 327 aaPredicted RBP23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 SPC24Q8NBT2 197 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 ZNF287Q9HBT7 754 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 BRMS1Q9HCU9 246 aa23.4■■□□□ 1.34
CHRNA3-202ENST00000348639 TEX11Q8IYF3 940 aa23.39■■□□□ 1.34
CHRNA3-202ENST00000348639 BPIFA3Q9BQP9 254 aa23.39■■□□□ 1.34
CHRNA3-202ENST00000348639 ZC3H12CQ9C0D7 883 aaKnown RBP23.39■■□□□ 1.34
CHRNA3-202ENST00000348639 COA1Q9GZY4 146 aa23.39■■□□□ 1.34
CHRNA3-202ENST00000348639 KCNH3Q9ULD8 1083 aa23.39■■□□□ 1.34
CHRNA3-202ENST00000348639 TSPY3P0CV98 308 aa23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 TSPY8P0CW00 308 aa23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 NLRP12P59046 1061 aa23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 ZNF579Q8NAF0 562 aaKnown RBP23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 PNMA1Q8ND90 353 aa23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 RHBDL3P58872 404 aa23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 DPP8Q6V1X1 898 aaPredicted RBP23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 TMX4Q9H1E5 349 aaPredicted RBP23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 TUBE1Q9UJT0 475 aa23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 SRPRBQ9Y5M8 271 aaKnown RBP23.38■■□□□ 1.33
CHRNA3-202ENST00000348639 SCG2P13521 617 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 RASA1P20936 1047 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 CDC25BP30305 580 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 NPY5RQ15761 445 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 PFKFB3Q16875 520 aaPredicted RBP23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 DPCR1Q3MIW9 517 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 ELOA2Q8IYF1 753 aaPredicted RBP23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 ZNF622Q969S3 477 aaKnown RBP eCLIP23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 MASTLQ96GX5 879 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 TRIM75PA6NK02 468 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 SLC44A5Q8NCS7 719 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 TNFRSF25Q93038 417 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 FAM13BQ9NYF5 915 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 SUGT1Q9Y2Z0 365 aa23.37■■□□□ 1.33
CHRNA3-202ENST00000348639 CDK5RAP2Q96SN8 1893 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 FLT1P17948 1338 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 USP17L3A6NCW0 530 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 USP17L4A6NCW7 530 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 KRBA2Q6ZNG9 492 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 C16orf86Q6ZW13 317 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 USP17L1Q7RTZ2 530 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 AOPEPQ8N6M6 819 aa23.36■■□□□ 1.33
CHRNA3-202ENST00000348639 F8W031 263 aaPredicted RBP23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 DOK7Q18PE1 504 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 LONRF3Q496Y0 759 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 EARS2Q5JPH6 523 aaKnown RBP23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 PIBF1Q8WXW3 757 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 DDX60LQ5H9U9 1706 aaKnown RBP23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 FAM205CA6NFA0 338 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 ATP2B1P20020 1258 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 CDK8P49336 464 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 GNAQP50148 359 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms