RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 GPRC5AQ8NFJ5 357 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 C12orf42Q96LP6 360 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 AS3MTQ9HBK9 375 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 PARP14Q460N5 1801 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 LDHCP07864 332 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 ASNSP08243 561 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 ZKSCAN1P17029 563 aaPredicted RBP11.78□□□□□ -0.52
MRPL55-204ENST00000348259 GSTO1P78417 241 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 ADGRA1Q86SQ6 560 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.78□□□□□ -0.52
MRPL55-204ENST00000348259 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
MRPL55-204ENST00000348259 APBA2Q99767 749 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
MRPL55-204ENST00000348259 FLRT1Q9NZU1 646 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 PI4KBQ9UBF8 816 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 AKAP2Q9Y2D5 859 aa11.78□□□□□ -0.52
MRPL55-204ENST00000348259 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 HOXC6P09630 235 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 RGS2P41220 211 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 IRX3P78415 501 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-204ENST00000348259 LBX2Q6XYB7 198 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 GTF3C2Q8WUA4 911 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-204ENST00000348259 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 ZBTB21Q9ULJ3 1066 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.53
MRPL55-204ENST00000348259 FLT1P17948 1338 aa11.77□□□□□ -0.53
MRPL55-204ENST00000348259 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
MRPL55-204ENST00000348259 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-204ENST00000348259 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
MRPL55-204ENST00000348259 HSP90AB4PQ58FF6 505 aa11.76□□□□□ -0.53
MRPL55-204ENST00000348259 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
MRPL55-204ENST00000348259 TRPV1Q8NER1 839 aa11.76□□□□□ -0.53
MRPL55-204ENST00000348259 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-204ENST00000348259 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
MRPL55-204ENST00000348259 SNX17Q15036 470 aa11.75□□□□□ -0.53
MRPL55-204ENST00000348259 BMP2KLQ5H9B9 411 aa11.75□□□□□ -0.53
MRPL55-204ENST00000348259 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
MRPL55-204ENST00000348259 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-204ENST00000348259 OSBPL3Q9H4L5 887 aa11.75□□□□□ -0.53
MRPL55-204ENST00000348259 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
MRPL55-204ENST00000348259 RABGAP1Q9Y3P9 1069 aa11.75□□□□□ -0.53
MRPL55-204ENST00000348259 REV3LO60673 3130 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 IGSF3O75054 1194 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 GDF11O95390 407 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 GRB14Q14449 540 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 PLEKHM2Q8IWE5 1019 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 LPAR1Q92633 364 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 LRRCC1Q9C099 1032 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 AATFQ9NY61 560 aaKnown RBP eCLIP11.74□□□□□ -0.53
MRPL55-204ENST00000348259 RAI14Q9P0K7 980 aa11.74□□□□□ -0.53
MRPL55-204ENST00000348259 DDX20Q9UHI6 824 aaKnown RBP11.74□□□□□ -0.53
MRPL55-204ENST00000348259 ZNFX1Q9P2E3 1918 aaKnown RBP11.74□□□□□ -0.53
MRPL55-204ENST00000348259 CHD7Q9P2D1 2997 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 SMCHD1A6NHR9 2005 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 SLC15A5A6NIM6 579 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 DNM1LO00429 736 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 CYP2E1P05181 493 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-204ENST00000348259 CYBAP13498 195 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 PTPREP23469 700 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L2Q6R6M4 530 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 CATSPERGQ6ZRH7 1159 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 MAPKAPK5Q8IW41 473 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 NAV1Q8NEY1 1877 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 TGFBRAP1Q8WUH2 860 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 ZNF512BQ96KM6 892 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-204ENST00000348259 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 PALD1Q9ULE6 856 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
MRPL55-204ENST00000348259 MSCO60682 206 aa11.72□□□□□ -0.53
MRPL55-204ENST00000348259 EIF5BO60841 1220 aaKnown RBP11.72□□□□□ -0.53
MRPL55-204ENST00000348259 UQCRFS1P1P0C7P4 283 aa11.72□□□□□ -0.53
MRPL55-204ENST00000348259 PLCG2P16885 1265 aa11.72□□□□□ -0.53
MRPL55-204ENST00000348259 NAA16Q6N069 864 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-204ENST00000348259 EDC3Q96F86 508 aaKnown RBP11.72□□□□□ -0.53
MRPL55-204ENST00000348259 NEUROD6Q96NK8 337 aa11.72□□□□□ -0.53
MRPL55-204ENST00000348259 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-204ENST00000348259 PAGR1Q9BTK6 254 aa11.72□□□□□ -0.53
MRPL55-204ENST00000348259 SENP6Q9GZR1 1112 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-204ENST00000348259 KIAA1683Q9H0B3 1180 aa11.72□□□□□ -0.53
MRPL55-204ENST00000348259 EHD4Q9H223 541 aa11.72□□□□□ -0.53
MRPL55-204ENST00000348259 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-204ENST00000348259 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L15C9J2P7 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L13C9JLJ4 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L11C9JVI0 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L18D6R9N7 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L22D6RA61 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L19D6RCP7 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 USP17L20D6RJB6 530 aa11.71□□□□□ -0.53
MRPL55-204ENST00000348259 BAG3O95817 575 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms