RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 USP17L1Q7RTZ2 530 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 CERS5Q8N5B7 392 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ANKS1AQ92625 1134 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 DNAJC25Q9H1X3 360 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 CBX8Q9HC52 389 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 SUGT1Q9Y2Z0 365 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 F8W031 263 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PFKFB1P16118 471 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 RASA1P20936 1047 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PLCB2Q00722 1185 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 RILPL1Q5EBL4 403 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ZSCAN30Q86W11 494 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PNMA1Q8ND90 353 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 PHF20Q9BVI0 1012 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ZNF287Q9HBT7 754 aa16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 RGS17Q9UGC6 210 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP1-202ENST00000346416 ZNF202O95125 648 aa16.27■□□□□ 0.19
CDK5RAP1-202ENST00000346416 KIF5BP33176 963 aa16.27■□□□□ 0.19
CDK5RAP1-202ENST00000346416 ZNF165P49910 485 aa16.27■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CCDC178Q5BJE1 867 aa16.27■□□□□ 0.19
CDK5RAP1-202ENST00000346416 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.19
CDK5RAP1-202ENST00000346416 TCP11L1Q9NUJ3 509 aa16.27■□□□□ 0.19
CDK5RAP1-202ENST00000346416 DDX60LQ5H9U9 1706 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 G3V3G9 751 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 H0YIN7 160 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 AP5Z1O43299 807 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CDK8P49336 464 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 EZH2Q15910 746 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 SLC15A2Q16348 729 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CCDC39Q9UFE4 941 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 MYH1P12882 1939 aa16.26■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CAVIN2O95810 425 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 POTEAQ6S8J7 498 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 EYA3Q99504 573 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 TTF2Q9UNY4 1162 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CLCN1P35523 988 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 KRT2P35908 639 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 EN1Q05925 392 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 STX1AQ16623 288 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CUTAO60888 179 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 PTMAP06454 111 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 STYK1Q6J9G0 422 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CAMKK2Q96RR4 588 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 NOL7Q9UMY1 257 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 HPSEQ9Y251 543 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 PCDHB6Q9Y5E3 794 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 SCG2P13521 617 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 SYKP43405 635 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 RESP18Q5W5W9 173 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 KRI1Q8N9T8 703 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 PIBF1Q8WXW3 757 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 DBNDD1Q9H9R9 158 aa16.24■□□□□ 0.19
CDK5RAP1-202ENST00000346416 FOCADQ5VW36 1801 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 SNED1Q8TER0 1413 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 A0A087WWV3 80 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 ATP2B1P20020 1258 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 SCNN1DP51172 638 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 PICALMQ13492 652 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 NPY5RQ15761 445 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 C11orf57Q6ZUT1 292 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 STAG2Q8N3U4 1231 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 KIAA1468Q9P260 1216 aa16.23■□□□□ 0.19
CDK5RAP1-202ENST00000346416 FAM237AA0A1B0GTK4 181 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 FAM205CA6NFA0 338 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CHRNA5P30532 468 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 GRM4Q14833 912 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 EARS2Q5JPH6 523 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 PODNQ7Z5L7 613 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 NEDD1Q8NHV4 660 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 ANO10Q9NW15 660 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 MAD2L2Q9UI95 211 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 QSER1Q2KHR3 1735 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 KCNQ5Q9NR82 932 aa16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP1-202ENST00000346416 PTPREP23469 700 aa16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 GNAQP50148 359 aa16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 IQCB1Q15051 598 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms