RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PASKQ96RG2 1323 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 TTC4O95801 387 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 CCHCR1Q8TD31 782 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 KRT9P35527 623 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 TNNI2P48788 182 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 RSAD2Q8WXG1 361 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 HYOU1Q9Y4L1 999 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 CASC4Q6P4E1 433 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 N4BP1O75113 896 aaKnown RBP21.33■■□□□ 1.01
HDAC4-201ENST00000345617 KSR2Q6VAB6 950 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 ACTR5Q9H9F9 607 aaPredicted RBP21.33■■□□□ 1.01
HDAC4-201ENST00000345617 PDZD8Q8NEN9 1154 aa21.33■■□□□ 1.01
HDAC4-201ENST00000345617 NBPF14Q5TI25 921 aa21.33■■□□□ 1
HDAC4-201ENST00000345617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.33■■□□□ 1
HDAC4-201ENST00000345617 PDE4DQ08499 809 aa21.33■■□□□ 1
HDAC4-201ENST00000345617 EXOC4Q96A65 974 aa21.33■■□□□ 1
HDAC4-201ENST00000345617 MRFAP1L1Q96HT8 127 aa21.33■■□□□ 1
HDAC4-201ENST00000345617 NYXQ9GZU5 481 aa21.33■■□□□ 1
HDAC4-201ENST00000345617 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
HDAC4-201ENST00000345617 C6orf229H3BNL8 230 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 NT5C3AQ9H0P0 336 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 TPCN1Q9ULQ1 816 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 KLHL30Q0D2K2 578 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 OGFOD1Q8N543 542 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 PHLPP2Q6ZVD8 1323 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 MAN1A2O60476 641 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 LMNAP02545 664 aaKnown RBP21.32■■□□□ 1
HDAC4-201ENST00000345617 NFE2L3Q9Y4A8 694 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 KIAA0586Q9BVV6 1533 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 TCHHQ07283 1943 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 DPH6Q7L8W6 267 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 RRP15Q9Y3B9 282 aaKnown RBP21.32■■□□□ 1
HDAC4-201ENST00000345617 NOC2LQ9Y3T9 749 aaKnown RBP21.32■■□□□ 1
HDAC4-201ENST00000345617 ABCC1P33527 1531 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 ANGPTL2Q9UKU9 493 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 STRN3Q13033 797 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 MYH9P35579 1960 aaKnown RBP21.32■■□□□ 1
HDAC4-201ENST00000345617 DISP3Q9P2K9 1392 aa21.32■■□□□ 1
HDAC4-201ENST00000345617 SESN3P58005 492 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 APOBRQ0VD83 1088 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 PLCB4Q15147 1175 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 LRGUKQ96M69 825 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 MAGEF1Q9HAY2 307 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 KRIT1O00522 736 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 RABEP2Q9H5N1 569 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 MSH6P52701 1360 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 CHPF2Q9P2E5 772 aa21.31■■□□□ 1
HDAC4-201ENST00000345617 RAD51AP2Q09MP3 1159 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 SART1O43290 800 aaKnown RBP21.3■■□□□ 1
HDAC4-201ENST00000345617 TAF12Q16514 161 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 NELFBQ8WX92 580 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 XRCC5P13010 732 aaKnown RBP21.3■■□□□ 1
HDAC4-201ENST00000345617 IPO11Q9UI26 975 aaKnown RBP21.3■■□□□ 1
HDAC4-201ENST00000345617 KDM5DQ9BY66 1539 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 LRRC8CQ8TDW0 803 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 PSPC1Q8WXF1 523 aaKnown RBP21.3■■□□□ 1
HDAC4-201ENST00000345617 KIFC3Q9BVG8 833 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 PALM3A6NDB9 673 aaPredicted RBP21.3■■□□□ 1
HDAC4-201ENST00000345617 PPP1R2P3Q6NXS1 205 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 DACT3Q96B18 629 aaPredicted RBP21.3■■□□□ 1
HDAC4-201ENST00000345617 MEIS3Q99687 375 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 TRIM31Q9BZY9 425 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 VPS37BQ9H9H4 285 aa21.3■■□□□ 1
HDAC4-201ENST00000345617 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 VGLL3A8MV65 326 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 LMNB1P20700 586 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 KLHDC4Q8TBB5 520 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 SPDL1Q96EA4 605 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 VPS16Q9H269 839 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 HAUS4Q9H6D7 363 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 SNRKQ9NRH2 765 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 CEP85Q6P2H3 762 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 NBPF5PQ86XG9 351 aaPredicted RBP21.29■■□□□ 1
HDAC4-201ENST00000345617 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 A0A087WUV0 522 aaPredicted RBP21.29■■□□□ 1
HDAC4-201ENST00000345617 SATB2Q9UPW6 733 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 MAST1Q9Y2H9 1570 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 FGFR1OP2Q9NVK5 253 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 AFG3L2Q9Y4W6 797 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 PALM2Q8IXS6 379 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 OR8K1Q8NGG5 319 aa21.29■■□□□ 1
HDAC4-201ENST00000345617 TMTC3Q6ZXV5 915 aa21.28■■□□□ 1
HDAC4-201ENST00000345617 CFAP61Q8NHU2 1237 aa21.28■■□□□ 1
HDAC4-201ENST00000345617 APOEP02649 317 aa21.28■■□□□ 1
HDAC4-201ENST00000345617 RRAGDQ9NQL2 400 aaPredicted RBP21.28■■□□□ 1
HDAC4-201ENST00000345617 CARD10Q9BWT7 1032 aa21.28■■□□□ 1
HDAC4-201ENST00000345617 DNM2P50570 870 aa21.28■■□□□ 1
HDAC4-201ENST00000345617 GABPAQ06546 454 aa21.28■■□□□ 1
HDAC4-201ENST00000345617 MRPL50Q8N5N7 158 aaKnown RBP21.28■■□□□ 1
HDAC4-201ENST00000345617 PPIP5K1Q6PFW1 1433 aa21.28■■□□□ 1
HDAC4-201ENST00000345617 EPHB4P54760 987 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 PDZD4Q76G19 769 aaPredicted RBP21.27■■□□□ 1
HDAC4-201ENST00000345617 LRRC8AQ8IWT6 810 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 FAM8A1Q9UBU6 413 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
HDAC4-201ENST00000345617 MAGEA1P43355 309 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 MTX1Q13505 466 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms