RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CDK5RAP2Q96SN8 1893 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 MANSC4A6NHS7 340 aaPredicted RBP14.04□□□□□ -0.16
SNCA-202ENST00000345009 REC8O95072 547 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 SHMT1P34896 483 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 GTF2A2P52657 109 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 MAP2K1Q02750 393 aaPredicted RBP14.04□□□□□ -0.16
SNCA-202ENST00000345009 SREBF2Q12772 1141 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 PPIL2Q13356 520 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 SNAPC2Q13487 334 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 OTUD7BQ6GQQ9 843 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 TMEM179Q6ZVK1 233 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 DNAJC5GQ8N7S2 189 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 PDCD7Q8N8D1 485 aaKnown RBP14.04□□□□□ -0.16
SNCA-202ENST00000345009 BEGAINQ9BUH8 593 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 ZHX2Q9Y6X8 837 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 NAV1Q8NEY1 1877 aa14.04□□□□□ -0.16
SNCA-202ENST00000345009 FAM155AB1AL88 458 aaPredicted RBP14.03□□□□□ -0.16
SNCA-202ENST00000345009 CXCL11O14625 94 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 FOXP2O15409 715 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 GDF11O95390 407 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 GH2P01242 217 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 RAB3GAP1Q15042 981 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 TOMM22Q9NS69 142 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 ZBTB21Q9ULJ3 1066 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 ROBO3Q96MS0 1386 aa14.03□□□□□ -0.16
SNCA-202ENST00000345009 BAZ2AQ9UIF9 1905 aaKnown RBP14.03□□□□□ -0.16
SNCA-202ENST00000345009 SLURP2P0DP57 97 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 CETPP11597 493 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 KIF23Q02241 960 aaPredicted RBP14.02□□□□□ -0.17
SNCA-202ENST00000345009 TRDNQ13061 729 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 AKNAD1Q5T1N1 836 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 RNF20Q5VTR2 975 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 STK11IPQ8N1F8 1099 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 SLC44A5Q8NCS7 719 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 ZNF280CQ8ND82 737 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 WDR18Q9BV38 432 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 CNNM2Q9H8M5 875 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 KANSL2Q9H9L4 492 aa14.02□□□□□ -0.17
SNCA-202ENST00000345009 IRF6O14896 467 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 ORC4O43929 436 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 TSPY3P0CV98 308 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 TSPY8P0CW00 308 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 HAND2P61296 217 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 PTH1RQ03431 593 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 CTDSPL2Q05D32 466 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 SPP2Q13103 211 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 FASTKD5Q7L8L6 764 aaKnown RBP14.01□□□□□ -0.17
SNCA-202ENST00000345009 SH2D4AQ9H788 454 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 AFG3L2Q9Y4W6 797 aa14.01□□□□□ -0.17
SNCA-202ENST00000345009 TRIM75PA6NK02 468 aa14□□□□□ -0.17
SNCA-202ENST00000345009 TSPY2A6NKD2 308 aa14□□□□□ -0.17
SNCA-202ENST00000345009 C19orf81C9J6K1 198 aa14□□□□□ -0.17
SNCA-202ENST00000345009 RANBP6O60518 1105 aaKnown RBP14□□□□□ -0.17
SNCA-202ENST00000345009 AOC2O75106 756 aa14□□□□□ -0.17
SNCA-202ENST00000345009 PRDM1O75626 825 aa14□□□□□ -0.17
SNCA-202ENST00000345009 ALDH1A1P00352 501 aa14□□□□□ -0.17
SNCA-202ENST00000345009 RASA1P20936 1047 aa14□□□□□ -0.17
SNCA-202ENST00000345009 RRP1BQ14684 758 aaKnown RBP14□□□□□ -0.17
SNCA-202ENST00000345009 STAG1Q8WVM7 1258 aa14□□□□□ -0.17
SNCA-202ENST00000345009 ESR2Q92731 530 aa14□□□□□ -0.17
SNCA-202ENST00000345009 FEZ1Q99689 392 aa14□□□□□ -0.17
SNCA-202ENST00000345009 KRT23Q9C075 422 aa14□□□□□ -0.17
SNCA-202ENST00000345009 IL25Q9H293 177 aa14□□□□□ -0.17
SNCA-202ENST00000345009 ARHGEF10LQ9HCE6 1279 aa14□□□□□ -0.17
SNCA-202ENST00000345009 KCNH4Q9UQ05 1017 aa14□□□□□ -0.17
SNCA-202ENST00000345009 CCL15-CCL14A0A0B4J2E2 113 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 USP17L10C9JJH3 530 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 EPB41L2O43491 1005 aaKnown RBP13.99□□□□□ -0.17
SNCA-202ENST00000345009 CA12O43570 354 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 FGRP09769 529 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 AKR1B1P15121 316 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 ZKSCAN1P17029 563 aaPredicted RBP13.99□□□□□ -0.17
SNCA-202ENST00000345009 TM4SF4P48230 202 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 USP14P54578 494 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 TFAP4Q01664 338 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 SEPT2Q15019 361 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 CCL15Q16663 113 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
SNCA-202ENST00000345009 NEDD1Q8NHV4 660 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 LSG1Q9H089 658 aaKnown RBP13.99□□□□□ -0.17
SNCA-202ENST00000345009 TMOD4Q9NZQ9 345 aa13.99□□□□□ -0.17
SNCA-202ENST00000345009 RBM8AQ9Y5S9 174 aaKnown RBP13.99□□□□□ -0.17
SNCA-202ENST00000345009 PCNTO95613 3336 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 SMIM22K7EJ46 135 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 GJA5P36382 358 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 BACE1P56817 501 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 ICA1Q05084 483 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 PABPC4Q13310 644 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNCA-202ENST00000345009 HS6ST3Q8IZP7 471 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 MS4A4AQ96JQ5 239 aa13.98□□□□□ -0.17
SNCA-202ENST00000345009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNCA-202ENST00000345009 DDX60LQ5H9U9 1706 aaKnown RBP13.98□□□□□ -0.17
SNCA-202ENST00000345009 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms