RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 SMCR8Q8TEV9 937 aaPredicted RBP9.5□□□□□ -0.89
HMGCR-202ENST00000343975 WASF1Q92558 559 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 TCEANC2Q96MN5 208 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 C19orf81C9J6K1 198 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 RBM25P49756 843 aaKnown RBP9.5□□□□□ -0.89
HMGCR-202ENST00000343975 STK3Q13188 491 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 SAFBQ15424 915 aaKnown RBP eCLIP9.5□□□□□ -0.89
HMGCR-202ENST00000343975 SLFN13Q68D06 897 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 PNMA1Q8ND90 353 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 RBM28Q9NW13 759 aaKnown RBP9.5□□□□□ -0.89
HMGCR-202ENST00000343975 SMC3Q9UQE7 1217 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 ATRNL1Q5VV63 1379 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 UNCXA6NJT0 531 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 TRAF5O00463 557 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 RASA1P20936 1047 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 OSBPP22059 807 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 SNAPC2Q13487 334 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 PNMA2Q9UL42 364 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 INPP5BP32019 993 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 GPATCH4Q5T3I0 446 aaKnown RBP9.49□□□□□ -0.89
HMGCR-202ENST00000343975 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 LRRC47Q8N1G4 583 aaKnown RBP9.49□□□□□ -0.89
HMGCR-202ENST00000343975 LZTS2Q9BRK4 669 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 ZSWIM5Q9P217 1185 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 MYH2Q9UKX2 1941 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 SEC24BO95487 1268 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 SREBF2Q12772 1141 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 NYAP2Q9P242 653 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
HMGCR-202ENST00000343975 H3BQV1 296 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 IFFO2Q5TF58 517 aa9.49□□□□□ -0.89
HMGCR-202ENST00000343975 ZKSCAN4Q969J2 545 aaPredicted RBP9.49□□□□□ -0.89
HMGCR-202ENST00000343975 WDR19Q8NEZ3 1342 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 ZBED4O75132 1171 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 CETPP11597 493 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 RASEFQ8IZ41 740 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 LPAR1Q92633 364 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 CEP95Q96GE4 821 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 DDAH1O94760 285 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 EEF2P13639 858 aaKnown RBP9.48□□□□□ -0.89
HMGCR-202ENST00000343975 SHMT1P34896 483 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 GTF2A2P52657 109 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 PPATQ06203 517 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 MKRN3Q13064 507 aaKnown RBP9.48□□□□□ -0.89
HMGCR-202ENST00000343975 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 CCDC12Q8WUD4 166 aaPredicted RBP9.48□□□□□ -0.89
HMGCR-202ENST00000343975 PGAP2Q9UHJ9 254 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 NEDD4P46934 1319 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 KIAA1551Q9HCM1 1747 aa9.48□□□□□ -0.89
HMGCR-202ENST00000343975 CXCL11O14625 94 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 BMP3P12645 472 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 PDCP20941 246 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 LIFRP42702 1097 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 DEFB115Q30KQ5 88 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 ASPRV1Q53RT3 343 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 RGMBQ6NW40 437 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 VAT1LQ9HCJ6 419 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 MTMR4Q9NYA4 1195 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 FLOT1O75955 427 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
HMGCR-202ENST00000343975 ARHGEF6Q15052 776 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 FAM160B2Q86V87 743 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 CCDC144CPQ8IYA2 1237 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 IL25Q9H293 177 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 COL2A1P02458 1487 aaPredicted RBP9.47□□□□□ -0.89
HMGCR-202ENST00000343975 MANSC4A6NHS7 340 aaPredicted RBP9.47□□□□□ -0.89
HMGCR-202ENST00000343975 SSRP1Q08945 709 aaKnown RBP9.47□□□□□ -0.89
HMGCR-202ENST00000343975 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 VGLL4Q14135 290 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 RRP36Q96EU6 259 aaKnown RBP9.47□□□□□ -0.89
HMGCR-202ENST00000343975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.47□□□□□ -0.89
HMGCR-202ENST00000343975 COL4A5P29400 1685 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 SCN9AQ15858 1988 aa9.47□□□□□ -0.89
HMGCR-202ENST00000343975 LTBP1Q14766 1721 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 CCT2P78371 535 aaKnown RBP9.46□□□□□ -0.89
HMGCR-202ENST00000343975 NOGQ13253 232 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 HOMER1Q86YM7 354 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 DCAF4Q8WV16 495 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 OPTNQ96CV9 577 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 AKAP11Q9UKA4 1901 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 CNTNAP1P78357 1384 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 CCL15-CCL14A0A0B4J2E2 113 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 K7ELQ4 463 aaPredicted RBP9.46□□□□□ -0.89
HMGCR-202ENST00000343975 CPA1P15085 419 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 AK2P54819 239 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 INHBEP58166 350 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 CCNA1P78396 465 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 PPIL2Q13356 520 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 PLS1Q14651 629 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 CCL15Q16663 113 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms