RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 RBM43Q6ZSC3 357 aaKnown RBP21.48■■□□□ 1.03
HOXA9-201ENST00000343483 FAM200AQ8TCP9 573 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 DAGLAQ9Y4D2 1042 aa21.48■■□□□ 1.03
HOXA9-201ENST00000343483 A0A1W2PQ27 194 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 A0A1W2PQ64 194 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 A0A1W2PQD8 194 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 TSPY3P0CV98 308 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 TSPY8P0CW00 308 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 FUT2Q10981 343 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 RCSD1Q6JBY9 416 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 TMTC3Q6ZXV5 915 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 KAT14Q9H8E8 782 aa21.47■■□□□ 1.03
HOXA9-201ENST00000343483 V9GY48 417 aaPredicted RBP21.47■■□□□ 1.03
HOXA9-201ENST00000343483 A0A1B0GVL5 298 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 MARCKSP29966 332 aaPredicted RBP21.46■■□□□ 1.03
HOXA9-201ENST00000343483 SLC39A14Q15043 492 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 ZNF444Q8N0Y2 327 aaPredicted RBP21.46■■□□□ 1.03
HOXA9-201ENST00000343483 CERS5Q8N5B7 392 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 ENGASEQ8NFI3 743 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 NLGN2Q8NFZ4 835 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 MXD3Q9BW11 206 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 IL17RBQ9NRM6 502 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 OFD1O75665 1012 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 SASS6Q6UVJ0 657 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 EYA3Q99504 573 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 SYT17Q9BSW7 474 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 ZNF219Q9P2Y4 722 aaPredicted RBP21.46■■□□□ 1.03
HOXA9-201ENST00000343483 NAV1Q8NEY1 1877 aa21.46■■□□□ 1.03
HOXA9-201ENST00000343483 USP17L3A6NCW0 530 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 USP17L4A6NCW7 530 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 PRPF3O43395 683 aaKnown RBP21.45■■□□□ 1.02
HOXA9-201ENST00000343483 XBP1P17861 261 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 NT5C2P49902 561 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 PKN1Q16512 942 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 USP17L1Q7RTZ2 530 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 FOXP1Q9H334 677 aaPredicted RBP21.45■■□□□ 1.02
HOXA9-201ENST00000343483 ZNF287Q9HBT7 754 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 VPS54Q9P1Q0 977 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 TTF2Q9UNY4 1162 aaKnown RBP21.45■■□□□ 1.02
HOXA9-201ENST00000343483 SUGT1Q9Y2Z0 365 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.45■■□□□ 1.02
HOXA9-201ENST00000343483 DLEC1Q9Y238 1755 aa21.45■■□□□ 1.02
HOXA9-201ENST00000343483 CHRNA5P30532 468 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 NDUFA8P51970 172 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.44■■□□□ 1.02
HOXA9-201ENST00000343483 DGKHQ86XP1 1220 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 MAP3K14Q99558 947 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 NR5A1Q13285 461 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 ANO6Q4KMQ2 910 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 STYK1Q6J9G0 422 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 FMR1NBQ8N0W7 255 aaPredicted RBP21.44■■□□□ 1.02
HOXA9-201ENST00000343483 SRBD1Q8N5C6 995 aaKnown RBP21.44■■□□□ 1.02
HOXA9-201ENST00000343483 DBNDD1Q9H9R9 158 aa21.44■■□□□ 1.02
HOXA9-201ENST00000343483 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.43■■□□□ 1.02
HOXA9-201ENST00000343483 CTAGE5O15320 804 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 AP5Z1O43299 807 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 RASA1P20936 1047 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 JMYQ8N9B5 988 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 PNMA1Q8ND90 353 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 OXER1Q8TDS5 423 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 CNTNAP5Q8WYK1 1306 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 WDHD1O75717 1129 aaPredicted RBP21.43■■□□□ 1.02
HOXA9-201ENST00000343483 KIF5BP33176 963 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 CDK8P49336 464 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 SCNN1DP51172 638 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 PICALMQ13492 652 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 PTPAQ15257 358 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 AXDND1Q5T1B0 1012 aaPredicted RBP21.43■■□□□ 1.02
HOXA9-201ENST00000343483 C16orf86Q6ZW13 317 aa21.43■■□□□ 1.02
HOXA9-201ENST00000343483 CCDC178Q5BJE1 867 aa21.42■■□□□ 1.02
HOXA9-201ENST00000343483 SHISA4Q96DD7 197 aa21.42■■□□□ 1.02
HOXA9-201ENST00000343483 STX8Q9UNK0 236 aa21.42■■□□□ 1.02
HOXA9-201ENST00000343483 PPP6R2O75170 966 aa21.41■■□□□ 1.02
HOXA9-201ENST00000343483 LUZP1Q86V48 1076 aa21.41■■□□□ 1.02
HOXA9-201ENST00000343483 PIBF1Q8WXW3 757 aa21.41■■□□□ 1.02
HOXA9-201ENST00000343483 CBX8Q9HC52 389 aa21.41■■□□□ 1.02
HOXA9-201ENST00000343483 TCP11L1Q9NUJ3 509 aa21.41■■□□□ 1.02
HOXA9-201ENST00000343483 CMA1P23946 247 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 TOB1P50616 345 aaPredicted RBP21.4■■□□□ 1.02
HOXA9-201ENST00000343483 RILPL1Q5EBL4 403 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 ANKS1AQ92625 1134 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 SDF4Q9BRK5 362 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 PHF20Q9BVI0 1012 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 MTMR7Q9Y216 660 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 PFKFB1P16118 471 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 PODNQ7Z5L7 613 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 CNKSR1Q969H4 720 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 KCNQ5Q9NR82 932 aa21.4■■□□□ 1.02
HOXA9-201ENST00000343483 KRT2P35908 639 aa21.39■■□□□ 1.01
HOXA9-201ENST00000343483 KIAA2012Q0VF49 1180 aa21.39■■□□□ 1.01
HOXA9-201ENST00000343483 ZNF830Q96NB3 372 aaPredicted RBP21.39■■□□□ 1.01
HOXA9-201ENST00000343483 CABP5Q9NP86 173 aa21.39■■□□□ 1.01
HOXA9-201ENST00000343483 SNED1Q8TER0 1413 aa21.39■■□□□ 1.01
HOXA9-201ENST00000343483 ATP2B1P20020 1258 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 TEKT1Q969V4 418 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 DNAJC25Q9H1X3 360 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 USP40Q9NVE5 1235 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 DDX60LQ5H9U9 1706 aaKnown RBP21.38■■□□□ 1.01
HOXA9-201ENST00000343483 CDK5RAP2Q96SN8 1893 aa21.38■■□□□ 1.01
HOXA9-201ENST00000343483 ERCC4Q92889 916 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms