RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 VPS54Q9P1Q0 977 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 ANGEL1Q9UNK9 670 aaKnown RBP13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 ARHGAP6O43182 974 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 GPAA1O43292 621 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 CLTAP09496 248 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 COG7P83436 770 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 MLKLQ8NB16 471 aa13.46□□□□□ -0.26
SEMA6A-202ENST00000343348 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.26
SEMA6A-202ENST00000343348 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.26
SEMA6A-202ENST00000343348 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.26
SEMA6A-202ENST00000343348 EXOC3O60645 756 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 NR1I2O75469 434 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 CD19P15391 556 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 PALM2Q8IXS6 379 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 KRT12Q99456 494 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 SMIM24O75264 130 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 SAT1P21673 171 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 HMGB2P26583 209 aaKnown RBP13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 CABP7Q86V35 215 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 TNNI3KQ59H18 835 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 SAR1BQ9Y6B6 198 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 FPGT-TNNI3KV9GXZ4 949 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 ITGA6P23229 1130 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 PCDHB13Q9Y5F0 798 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 MX2P20592 715 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 IFNB1P01574 187 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 XAGE2Q96GT9 111 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
SEMA6A-202ENST00000343348 B4DLN1 442 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 RPS6KA2Q15349 733 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 HAUS3Q68CZ6 603 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 CXorf38Q8TB03 319 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 RSAD2Q8WXG1 361 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 TCP10Q12799 353 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 MORC4Q8TE76 937 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 LRWD1Q9UFC0 647 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 ZNF445P59923 1031 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 TPTE2Q6XPS3 522 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 NACA2Q9H009 215 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 DNM3Q9UQ16 869 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 ADGRL1O94910 1474 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 RPRD2Q5VT52 1461 aaKnown RBP13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 PTPN21Q16825 1174 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 SYCE1Q8N0S2 351 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 CPXCR1Q8N123 301 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 RAB3IPQ96QF0 476 aaPredicted RBP13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 ANO3Q9BYT9 981 aa13.44□□□□□ -0.26
SEMA6A-202ENST00000343348 KRIT1O00522 736 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 PPP1R2P41236 205 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 CYP2J2P51589 502 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 MTMR3Q13615 1198 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 FAM47AQ5JRC9 791 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 KAZNQ674X7 775 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 CERS3Q8IU89 383 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 DCLK2Q8N568 766 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 SEPT10Q9P0V9 454 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 RSPH3Q86UC2 560 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 TMEM87BQ96K49 555 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 BIN2Q9UBW5 565 aaPredicted RBP13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 PPME1Q9Y570 386 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 SPECC1L-ADORA2AF8WAN1 911 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 RNF40O75150 1001 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 FLOT1O75955 427 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 BCRP11274 1271 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 KCTD16Q68DU8 428 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 MRPL46Q9H2W6 279 aaKnown RBP13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 AMFRQ9UKV5 643 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 NAA35Q5VZE5 725 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 SCYL2Q6P3W7 929 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 ST7Q9NRC1 585 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 NOP56O00567 594 aaKnown RBP13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 TROVE2P10155 538 aaKnown RBP eCLIP13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 TPH2Q8IWU9 490 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 CAPS2Q9BXY5 557 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 PRKG1Q13976 671 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 WHAMMP3Q1A5X7 153 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 LGSNQ5TDP6 509 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 SCYL1Q96KG9 808 aa13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 LLPHQ9BRT6 129 aaKnown RBP13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
SEMA6A-202ENST00000343348 CD109Q6YHK3 1445 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 TNNI1P19237 187 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 SLC12A2P55011 1212 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 IL1RL1Q01638 556 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 KRT40Q6A162 431 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 EEF2KMTQ96G04 330 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 MAP3K5Q99683 1374 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 GOLGA8FQ08AF8 430 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 GOLGA8DPQ0D2H9 430 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 RAB17Q9H0T7 212 aa13.42□□□□□ -0.26
SEMA6A-202ENST00000343348 ADCY8P40145 1251 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms