RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 CEP126Q9P2H0 1117 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 CEP131Q9UPN4 1083 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 REXO2Q9Y3B8 237 aaKnown RBP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 DPYDQ12882 1025 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 STIM1Q13586 685 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 CPLX3Q8WVH0 158 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 XAGE2Q96GT9 111 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 UBE2Q2LH0YL09 131 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 AGPSO00116 658 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 ADD2P35612 726 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 ZAP70P43403 619 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 PIP4K2AP48426 406 aaPredicted RBP10.92□□□□□ -0.66
HOXA1-201ENST00000343060 GSCP56915 257 aaPredicted RBP10.92□□□□□ -0.66
HOXA1-201ENST00000343060 RUBCNQ92622 972 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 SMARCC1Q92922 1105 aaPredicted RBP10.92□□□□□ -0.66
HOXA1-201ENST00000343060 ZNF594Q96JF6 807 aaPredicted RBP10.92□□□□□ -0.66
HOXA1-201ENST00000343060 SLC26A6Q9BXS9 759 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 PUS3Q9BZE2 481 aaKnown RBP10.92□□□□□ -0.66
HOXA1-201ENST00000343060 CSRNP2Q9H175 543 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 HAUS4Q9H6D7 363 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 PCDHB6Q9Y5E3 794 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 MEGF6O75095 1541 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 A0A087X0B3 334 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 EXOC5O00471 708 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 CKAP4Q07065 602 aaKnown RBP10.92□□□□□ -0.66
HOXA1-201ENST00000343060 SPAG1Q07617 926 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 KRT31Q15323 416 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 ALX1Q15699 326 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 USP49Q70CQ1 688 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 DRC1Q96MC2 740 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
HOXA1-201ENST00000343060 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 DISP2A7MBM2 1401 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 RIC1Q4ADV7 1423 aa10.92□□□□□ -0.66
HOXA1-201ENST00000343060 UBR2Q8IWV8 1755 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 B4E1Z4 1266 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 RNF225M0QZC1 329 aaPredicted RBP10.91□□□□□ -0.66
HOXA1-201ENST00000343060 HSP90AB3PQ58FF7 597 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 GBP6Q6ZN66 633 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 TEX2Q8IWB9 1127 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 FAM76AQ8TAV0 307 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 KAT2BQ92831 832 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 PAGE5Q96GU1 130 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.91□□□□□ -0.66
HOXA1-201ENST00000343060 PLEKHA4Q9H4M7 779 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 GRIN2DO15399 1336 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 ANKRD65E5RJM6 399 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 NDUFA10O95299 355 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 GUCY1A2P33402 732 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 GGCXP38435 758 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 MMP14P50281 582 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 COPB1P53618 953 aaKnown RBP10.91□□□□□ -0.66
HOXA1-201ENST00000343060 RCAN1P53805 252 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 STX17P56962 302 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 AKAP17AQ02040 695 aaKnown RBP10.91□□□□□ -0.66
HOXA1-201ENST00000343060 TMEM67Q5HYA8 995 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 TTC5Q8N0Z6 440 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 ZNF512BQ96KM6 892 aaPredicted RBP10.91□□□□□ -0.66
HOXA1-201ENST00000343060 MMS19Q96T76 1030 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 SLF1Q9BQI6 1058 aa10.91□□□□□ -0.66
HOXA1-201ENST00000343060 MYH13Q9UKX3 1938 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 IRAK1P51617 712 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 PPFIA1Q13136 1202 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 UBE3CQ15386 1083 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 CCDC91Q7Z6B0 441 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 AENQ8WTP8 325 aaKnown RBP10.9□□□□□ -0.66
HOXA1-201ENST00000343060 SELENOOQ9BVL4 669 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 KAT14Q9H8E8 782 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 EPN1Q9Y6I3 576 aaPredicted RBP10.9□□□□□ -0.66
HOXA1-201ENST00000343060 ALS2Q96Q42 1657 aa10.9□□□□□ -0.66
HOXA1-201ENST00000343060 NBPF26B4DH59 902 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 ERLIN2O94905 339 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 KLHL10Q6JEL2 608 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 NBPF10Q6P3W6 841 aaKnown RBP10.9□□□□□ -0.67
HOXA1-201ENST00000343060 CCNI2Q6ZMN8 369 aaPredicted RBP10.9□□□□□ -0.67
HOXA1-201ENST00000343060 NFXL1Q6ZNB6 911 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 ZNF572Q7Z3I7 529 aaPredicted RBP10.9□□□□□ -0.67
HOXA1-201ENST00000343060 POTEDQ86YR6 584 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 THEMISQ8N1K5 641 aaPredicted RBP10.9□□□□□ -0.67
HOXA1-201ENST00000343060 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 NBPF15Q8N660 670 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 EHBP1Q8NDI1 1231 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 DNAJC7Q99615 494 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 SH3GL2Q99962 352 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 CRACR2AQ9BSW2 395 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 RWDD2AQ9UIY3 292 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 SAR1BQ9Y6B6 198 aa10.9□□□□□ -0.67
HOXA1-201ENST00000343060 ANO9A1A5B4 782 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 EIF3HO15372 352 aaKnown RBP eCLIP10.89□□□□□ -0.67
HOXA1-201ENST00000343060 DEXIO95424 95 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 ATP1A1P05023 1023 aaKnown RBP10.89□□□□□ -0.67
HOXA1-201ENST00000343060 KRT9P35527 623 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 HERVK_113P62684 666 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 RIN2Q8WYP3 895 aaPredicted RBP10.89□□□□□ -0.67
HOXA1-201ENST00000343060 RAPGEF4Q8WZA2 1011 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 DCAF5Q96JK2 942 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms