RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SYT10Q6XYQ8 523 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 CEP128Q6ZU80 1094 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 GMNNO75496 209 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-202ENST00000342494 PFDN4Q9NQP4 134 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 STIM2Q9P246 746 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 LOC102724428A0A0B4J2F2 783 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 DYNC1I1O14576 645 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 SIK1P57059 783 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 PPP2R5DQ14738 602 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 SLC9C1Q4G0N8 1177 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-202ENST00000342494 ZBTB8OSQ8IWT0 167 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 MLKLQ8NB16 471 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 RXRBP28702 533 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 ZNF772Q68DY9 489 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-202ENST00000342494 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBE3B-202ENST00000342494 V9GYY5 206 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-202ENST00000342494 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 POLR2MP0CAP2 368 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 ERCC3P19447 782 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 BTDP43251 543 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 ICA1Q05084 483 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 IWS1Q96ST2 819 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
UBE3B-202ENST00000342494 YARSP54577 528 aaKnown RBP16.66■□□□□ 0.26
UBE3B-202ENST00000342494 YWHAEP62258 255 aaKnown RBP16.66■□□□□ 0.26
UBE3B-202ENST00000342494 FAM102BQ5T8I3 360 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 CYP26C1Q6V0L0 522 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 E7EWF7 191 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 BCAMP50895 628 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 ZNF654Q8IZM8 581 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 PSTPIP2Q9H939 334 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 FLOT1O75955 427 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 ARHGEF6Q15052 776 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 CPLX4Q7Z7G2 160 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 GSDMBQ8TAX9 411 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 FRMPD2Q68DX3 1309 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-202ENST00000342494 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-202ENST00000342494 GIPC1O14908 333 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 ACTN4O43707 911 aaKnown RBP16.66■□□□□ 0.26
UBE3B-202ENST00000342494 TRIM37O94972 964 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 MCTP2Q6DN12 878 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 MCF2L2Q86YR7 1114 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
UBE3B-202ENST00000342494 TTLL3Q9Y4R7 772 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 ATP7AQ04656 1500 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 TPD52P55327 224 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-202ENST00000342494 FAM196AQ6ZSG2 479 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 PNMA2Q9UL42 364 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 KDM3AQ9Y4C1 1321 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 SORBS3O60504 671 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 LTKP29376 864 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 LRRC47Q8N1G4 583 aaKnown RBP16.65■□□□□ 0.26
UBE3B-202ENST00000342494 RDH13Q8NBN7 331 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-202ENST00000342494 CHRNDQ07001 517 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-202ENST00000342494 ZSCAN10Q96SZ4 725 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-202ENST00000342494 ADPGKQ9BRR6 497 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 PCCAP05165 728 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-202ENST00000342494 PRR16Q569H4 304 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 FAM173BQ6P4H8 233 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 CD2APQ9Y5K6 639 aa16.65■□□□□ 0.26
UBE3B-202ENST00000342494 RNASE9P60153 205 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 ITIH3Q06033 890 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 IPO4Q8TEX9 1081 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 MRRFQ96E11 262 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 TCOF1Q13428 1488 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 DNAJC21Q5F1R6 531 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 PPANQ9NQ55 473 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 ARHGEF12Q9NZN5 1544 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 KCNQ3O43525 872 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 ZNF202O95125 648 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 TUBBP07437 444 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 ATP5DP30049 168 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 SETDB1Q15047 1291 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 SDR42E1Q8WUS8 393 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 TIGD1Q96MW7 591 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 SEC62Q99442 399 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 ZKSCAN5Q9Y2L8 839 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 ZEB2O60315 1214 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
UBE3B-202ENST00000342494 ST7Q9NRC1 585 aa16.64■□□□□ 0.25
UBE3B-202ENST00000342494 IFNL3Q8IZI9 196 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 MED10Q9BTT4 135 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 PPEF1O14829 653 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-202ENST00000342494 POSTNQ15063 836 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 XKR9Q5GH70 373 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms