RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 NBPF3Q9H094 633 aa15.84■□□□□ 0.13
NECTIN1-203ENST00000341398 IL1RAPL2Q9NP60 686 aa15.84■□□□□ 0.13
NECTIN1-203ENST00000341398 RABGAP1Q9Y3P9 1069 aa15.84■□□□□ 0.13
NECTIN1-203ENST00000341398 NDUFB9Q9Y6M9 179 aa15.84■□□□□ 0.13
NECTIN1-203ENST00000341398 RGS2P41220 211 aa15.83■□□□□ 0.12
NECTIN1-203ENST00000341398 ZYXQ15942 572 aaKnown RBP15.83■□□□□ 0.12
NECTIN1-203ENST00000341398 PLEKHH3Q7Z736 793 aa15.83■□□□□ 0.12
NECTIN1-203ENST00000341398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.83■□□□□ 0.12
NECTIN1-203ENST00000341398 TXNRD2Q9NNW7 524 aa15.83■□□□□ 0.12
NECTIN1-203ENST00000341398 DDX19BQ9UMR2 479 aa15.83■□□□□ 0.12
NECTIN1-203ENST00000341398 PLXNB2O15031 1838 aa15.83■□□□□ 0.12
NECTIN1-203ENST00000341398 A0A1W2PPC1 479 aa15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 ZKSCAN1P17029 563 aaPredicted RBP15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 SHROOM1Q2M3G4 852 aaPredicted RBP15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 Q3C1V9 767 aa15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 GPR142Q7Z601 462 aa15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 TRIB2Q92519 343 aa15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 KIAA1683Q9H0B3 1180 aa15.82■□□□□ 0.12
NECTIN1-203ENST00000341398 APBB1O00213 710 aa15.81■□□□□ 0.12
NECTIN1-203ENST00000341398 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
NECTIN1-203ENST00000341398 CATSPERGQ6ZRH7 1159 aa15.81■□□□□ 0.12
NECTIN1-203ENST00000341398 RIOK1Q9BRS2 568 aaKnown RBP15.81■□□□□ 0.12
NECTIN1-203ENST00000341398 MCM9Q9NXL9 1143 aa15.81■□□□□ 0.12
NECTIN1-203ENST00000341398 OGDHLQ9ULD0 1010 aa15.81■□□□□ 0.12
NECTIN1-203ENST00000341398 IVNS1ABPQ9Y6Y0 642 aa15.81■□□□□ 0.12
NECTIN1-203ENST00000341398 PDE6AP16499 860 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 PLCD1P51178 756 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 TRIM32Q13049 653 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 MORN1Q5T089 497 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 MAP3K21Q5TCX8 1036 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 WDR78Q5VTH9 848 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 EDC3Q96F86 508 aaKnown RBP15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 DNAJC2Q99543 621 aaKnown RBP15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 BCL11AQ9H165 835 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 PORCNQ9H237 461 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 C11orf49Q9H6J7 331 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 A0A0C4DFX4 3053 aa15.8■□□□□ 0.12
NECTIN1-203ENST00000341398 ZNF532Q9HCE3 1301 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 CUL9Q8IWT3 2517 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 GOLIM4O00461 696 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 MPHOSPH10O00566 681 aaKnown RBP15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 PEX10O60683 326 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 SHMT1P34896 483 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 AMOTL1Q8IY63 956 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 DIS3LQ8TF46 1054 aaKnown RBP15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 USP6NLQ92738 828 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 APBA2Q99767 749 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 HOXC10Q9NYD6 342 aa15.79■□□□□ 0.12
NECTIN1-203ENST00000341398 MYH8P13535 1937 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 NAV1Q8NEY1 1877 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 VCAM1P19320 739 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 CACNB2Q08289 660 aaPredicted RBP15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 MAP2K5Q13163 448 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 MFSD14CQ5VZR4 134 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 LBX2Q6XYB7 198 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 DDRGK1Q96HY6 314 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 PRO3102Q9H379 93 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 SWAP70Q9UH65 585 aa15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 RANBP2P49792 3224 aaKnown RBP15.78■□□□□ 0.12
NECTIN1-203ENST00000341398 SLC15A5A6NIM6 579 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 SEPT2Q15019 361 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 C7orf61Q8IZ16 206 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 ACER1Q8TDN7 264 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 RPAP3Q9H6T3 665 aaPredicted RBP15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 ZBTB40Q9NUA8 1239 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 PAG1Q9NWQ8 432 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 STAP2Q9UGK3 403 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 COG6Q9Y2V7 657 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 ALPK3Q96L96 1907 aa15.77■□□□□ 0.12
NECTIN1-203ENST00000341398 DLL1O00548 723 aa15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 PTPREP23469 700 aa15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 ATP2B2Q01814 1243 aa15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 GABPAQ06546 454 aa15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 COG2Q14746 738 aa15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 DDX60LQ5H9U9 1706 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 TMEM179Q6ZVK1 233 aa15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 DCP1AQ9NPI6 582 aaPredicted RBP15.76■□□□□ 0.11
NECTIN1-203ENST00000341398 STRNO43815 780 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 CNMDO75829 334 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 BMP8BP34820 402 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 CCL14Q16627 93 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 ZSCAN25Q6NSZ9 544 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 BOLA2Q9H3K6 86 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 SH2D4AQ9H788 454 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 ARHGEF10LQ9HCE6 1279 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 TCRBV5S4A2TA0A5A2 114 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 SPDYE16A6NNV3 312 aaPredicted RBP15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 MSCO60682 206 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 ATP5JP18859 108 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 GUCY1A2P33402 732 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 DPP9Q86TI2 863 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 LCORLQ8N3X6 602 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 CCDC17Q96LX7 622 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 TANGO6Q9C0B7 1094 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 ARMT1Q9H993 441 aa15.75■□□□□ 0.11
NECTIN1-203ENST00000341398 SLC5A4Q9NY91 659 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms