RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ARPP21Q9UBL0 812 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-203ENST00000340192 PTCH2Q9Y6C5 1203 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 FMNL1O95466 1100 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-203ENST00000340192 HOXA7P31268 230 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-203ENST00000340192 CDK8P49336 464 aa17.51■□□□□ 0.39
ERCC1-203ENST00000340192 ANKRD13CQ8N6S4 541 aa17.51■□□□□ 0.39
ERCC1-203ENST00000340192 ACER1Q8TDN7 264 aa17.51■□□□□ 0.39
ERCC1-203ENST00000340192 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-203ENST00000340192 APPP05067 770 aa17.5■□□□□ 0.39
ERCC1-203ENST00000340192 AKR1B1P15121 316 aa17.5■□□□□ 0.39
ERCC1-203ENST00000340192 FCGRTP55899 365 aa17.5■□□□□ 0.39
ERCC1-203ENST00000340192 IRX3P78415 501 aaPredicted RBP17.5■□□□□ 0.39
ERCC1-203ENST00000340192 SBK1Q52WX2 424 aa17.5■□□□□ 0.39
ERCC1-203ENST00000340192 TMEM179Q6ZVK1 233 aa17.5■□□□□ 0.39
ERCC1-203ENST00000340192 C12orf42Q96LP6 360 aa17.5■□□□□ 0.39
ERCC1-203ENST00000340192 KIAA1683Q9H0B3 1180 aa17.5■□□□□ 0.39
ERCC1-203ENST00000340192 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
ERCC1-203ENST00000340192 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
ERCC1-203ENST00000340192 GCLCP48506 637 aaPredicted RBP17.49■□□□□ 0.39
ERCC1-203ENST00000340192 TDO2P48775 406 aa17.49■□□□□ 0.39
ERCC1-203ENST00000340192 RGS19P49795 217 aa17.49■□□□□ 0.39
ERCC1-203ENST00000340192 USP14P54578 494 aa17.49■□□□□ 0.39
ERCC1-203ENST00000340192 PRMT2P55345 433 aa17.49■□□□□ 0.39
ERCC1-203ENST00000340192 FAM110CQ1W6H9 321 aa17.49■□□□□ 0.39
ERCC1-203ENST00000340192 PLEKHM2Q8IWE5 1019 aa17.49■□□□□ 0.39
ERCC1-203ENST00000340192 SRRDQ9UH36 339 aa17.49■□□□□ 0.39
ERCC1-203ENST00000340192 MINDY4BA8MYZ0 360 aa17.48■□□□□ 0.39
ERCC1-203ENST00000340192 HOXD10P28358 340 aa17.48■□□□□ 0.39
ERCC1-203ENST00000340192 SLC9C1Q4G0N8 1177 aa17.48■□□□□ 0.39
ERCC1-203ENST00000340192 IFNL3Q8IZI9 196 aa17.48■□□□□ 0.39
ERCC1-203ENST00000340192 ARMC5Q96C12 935 aa17.48■□□□□ 0.39
ERCC1-203ENST00000340192 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
ERCC1-203ENST00000340192 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
ERCC1-203ENST00000340192 ROBO3Q96MS0 1386 aa17.48■□□□□ 0.39
ERCC1-203ENST00000340192 GREB1LQ9C091 1923 aaPredicted RBP17.48■□□□□ 0.39
ERCC1-203ENST00000340192 RBBP6Q7Z6E9 1792 aaKnown RBP17.48■□□□□ 0.39
ERCC1-203ENST00000340192 MYPNQ86TC9 1320 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 TRIM6-TRIM34B2RNG4 842 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 VCAM1P19320 739 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 HERVK_113P62684 666 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 STK11IPQ8N1F8 1099 aa17.47■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L15C9J2P7 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L13C9JLJ4 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L11C9JVI0 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L18D6R9N7 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L22D6RA61 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L17D6RBQ6 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L19D6RCP7 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L20D6RJB6 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 ICA1Q05084 483 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 PRKCZQ05513 592 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 USP17L24Q0WX57 530 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 NBPF11Q86T75 865 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 SIAH1Q8IUQ4 282 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 RILPL2Q969X0 211 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 NACAP1Q9BZK3 213 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 OSBPL3Q9H4L5 887 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 DOCK3Q8IZD9 2030 aa17.46■□□□□ 0.39
ERCC1-203ENST00000340192 TNPO2O14787 897 aaKnown RBP17.45■□□□□ 0.38
ERCC1-203ENST00000340192 PEX10O60683 326 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 TICAM2Q86XR7 235 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 RAET1EQ8TD07 263 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 SH3TC2Q8TF17 1288 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 ZNF333Q96JL9 665 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 FAM227BQ96M60 508 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 NAPBQ9H115 298 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 RPAP3Q9H6T3 665 aaPredicted RBP17.45■□□□□ 0.38
ERCC1-203ENST00000340192 MKNK2Q9HBH9 465 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 ARHGEF10LQ9HCE6 1279 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 TXNRD2Q9NNW7 524 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 HELLSQ9NRZ9 838 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 MORF4L1Q9UBU8 362 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 GABRQQ9UN88 632 aa17.45■□□□□ 0.38
ERCC1-203ENST00000340192 FOXP2O15409 715 aa17.44■□□□□ 0.38
ERCC1-203ENST00000340192 RASA1P20936 1047 aa17.44■□□□□ 0.38
ERCC1-203ENST00000340192 MLLT1Q03111 559 aaPredicted RBP17.44■□□□□ 0.38
ERCC1-203ENST00000340192 CATSPERGQ6ZRH7 1159 aa17.44■□□□□ 0.38
ERCC1-203ENST00000340192 RBPJLQ9UBG7 517 aa17.44■□□□□ 0.38
ERCC1-203ENST00000340192 PLXNB2O15031 1838 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 A0A0D9SFI3 127 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 EEF2P13639 858 aaKnown RBP17.43■□□□□ 0.38
ERCC1-203ENST00000340192 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 POTEEQ6S8J3 1075 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 GPRC5AQ8NFJ5 357 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 GTF3C2Q8WUA4 911 aaPredicted RBP17.43■□□□□ 0.38
ERCC1-203ENST00000340192 COA7Q96BR5 231 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
ERCC1-203ENST00000340192 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 KANSL2Q9H9L4 492 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 TMX2Q9Y320 296 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 MKI67P46013 3256 aaKnown RBP17.43■□□□□ 0.38
ERCC1-203ENST00000340192 RLFQ13129 1914 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 MYH4Q9Y623 1939 aa17.43■□□□□ 0.38
ERCC1-203ENST00000340192 PARP14Q460N5 1801 aa17.42■□□□□ 0.38
ERCC1-203ENST00000340192 PRDM1O75626 825 aa17.42■□□□□ 0.38
ERCC1-203ENST00000340192 FLT3LGP49771 235 aa17.42■□□□□ 0.38
ERCC1-203ENST00000340192 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms