RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 ZFP91Q96JP5 570 aaPredicted RBP16.31■□□□□ 0.2
LIPA-202ENST00000336233 CABP5Q9NP86 173 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 FANCLQ9NW38 375 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 VGLL3A8MV65 326 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 FCHSD1Q86WN1 690 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 CSRNP2Q9H175 543 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 TRMT1Q9NXH9 659 aaKnown RBP16.3■□□□□ 0.2
LIPA-202ENST00000336233 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 PRR29P0C7W0 189 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 FERMT2Q96AC1 680 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 ATP8A2Q9NTI2 1148 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 CNTNAP5Q8WYK1 1306 aa16.3■□□□□ 0.2
LIPA-202ENST00000336233 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 RPS8P62241 208 aaKnown RBP16.29■□□□□ 0.2
LIPA-202ENST00000336233 MECOMQ03112 1051 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
LIPA-202ENST00000336233 VPS54Q9P1Q0 977 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 IRS2Q9Y4H2 1338 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 BRD2P25440 801 aaKnown RBP16.29■□□□□ 0.2
LIPA-202ENST00000336233 ERCC5P28715 1186 aaPredicted RBP16.29■□□□□ 0.2
LIPA-202ENST00000336233 TBX2Q13207 712 aaPredicted RBP16.29■□□□□ 0.2
LIPA-202ENST00000336233 NPY5RQ15761 445 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 SH3RF1Q7Z6J0 888 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 BRMS1Q9HCU9 246 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
LIPA-202ENST00000336233 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
LIPA-202ENST00000336233 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 CCDC34Q96HJ3 373 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 L2HGDHQ9H9P8 463 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 DCP1AQ9NPI6 582 aaPredicted RBP16.28■□□□□ 0.2
LIPA-202ENST00000336233 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 USP17L21D6R901 530 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 HIBADHP31937 336 aaKnown RBP16.28■□□□□ 0.2
LIPA-202ENST00000336233 PLCD1P51178 756 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 PPP4R3BQ5MIZ7 849 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 TMEM51Q9NW97 253 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 CGNQ9P2M7 1197 aaKnown RBP16.28■□□□□ 0.2
LIPA-202ENST00000336233 BTAF1O14981 1849 aa16.28■□□□□ 0.2
LIPA-202ENST00000336233 SBF2Q86WG5 1849 aa16.27■□□□□ 0.2
LIPA-202ENST00000336233 RPS6KA4O75676 772 aa16.27■□□□□ 0.2
LIPA-202ENST00000336233 TOP1P11387 765 aaKnown RBP16.27■□□□□ 0.2
LIPA-202ENST00000336233 KLRK1P26718 216 aa16.27■□□□□ 0.2
LIPA-202ENST00000336233 ERO1AQ96HE7 468 aa16.27■□□□□ 0.2
LIPA-202ENST00000336233 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
LIPA-202ENST00000336233 V9GY48 417 aaPredicted RBP16.27■□□□□ 0.2
LIPA-202ENST00000336233 FAM205CA6NFA0 338 aa16.27■□□□□ 0.2
LIPA-202ENST00000336233 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.2
LIPA-202ENST00000336233 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
LIPA-202ENST00000336233 SLFN14P0C7P3 912 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 TRAPPC10P48553 1259 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 TNRC6CQ9HCJ0 1690 aaKnown RBP16.26■□□□□ 0.19
LIPA-202ENST00000336233 TMEM232C9JQI7 657 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 USP49Q70CQ1 688 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 NFE2L3Q9Y4A8 694 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 PRDM1O75626 825 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 NUTM2AQ8IVF1 878 aaPredicted RBP16.26■□□□□ 0.19
LIPA-202ENST00000336233 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
LIPA-202ENST00000336233 SETDB2Q96T68 719 aa16.26■□□□□ 0.19
LIPA-202ENST00000336233 PHLPP2Q6ZVD8 1323 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 ATP2C1P98194 919 aaPredicted RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 VPS72Q15906 364 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 BICDL1Q6ZP65 573 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 SRBD1Q8N5C6 995 aaKnown RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 MED15Q96RN5 788 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 FEZ1Q99689 392 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 A0A087X0B3 334 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 SLU7O95391 586 aaKnown RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 CCDC93Q567U6 631 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 SPTY2D1Q68D10 685 aaPredicted RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
LIPA-202ENST00000336233 GRAMD1CQ8IYS0 662 aa16.25■□□□□ 0.19
LIPA-202ENST00000336233 PFKFB3Q16875 520 aaPredicted RBP16.24■□□□□ 0.19
LIPA-202ENST00000336233 THSD7AQ9UPZ6 1657 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 LY75O60449 1722 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 TAF1LQ8IZX4 1826 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 ARHGAP6O43182 974 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 SCG2P13521 617 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 ATP2B1P20020 1258 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 TM4SF1P30408 202 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
LIPA-202ENST00000336233 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
LIPA-202ENST00000336233 PYM1Q9BRP8 204 aaKnown RBP16.24■□□□□ 0.19
LIPA-202ENST00000336233 PRDX5P30044 214 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms