RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 ZBED4O75132 1171 aa18.4■□□□□ 0.54
PDZD8-201ENST00000334464 KIF24Q5T7B8 1368 aa18.4■□□□□ 0.54
PDZD8-201ENST00000334464 ANXA1P04083 346 aa18.4■□□□□ 0.54
PDZD8-201ENST00000334464 INPP5BP32019 993 aa18.4■□□□□ 0.54
PDZD8-201ENST00000334464 AKNAD1Q5T1N1 836 aa18.4■□□□□ 0.54
PDZD8-201ENST00000334464 IFIH1Q9BYX4 1025 aaKnown RBP18.39■□□□□ 0.54
PDZD8-201ENST00000334464 BIRC2Q13490 618 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 CLSTN2Q9H4D0 955 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 POSTNQ15063 836 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 RUNDC3BQ96NL0 473 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
PDZD8-201ENST00000334464 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 PPFIA4O75335 1185 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 ATF7P17544 494 aaPredicted RBP18.39■□□□□ 0.53
PDZD8-201ENST00000334464 RBSNQ9H1K0 784 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 RPS6KA1Q15418 735 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 NR1I2O75469 434 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 CTTNBP2NLQ9P2B4 639 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
PDZD8-201ENST00000334464 GBP7Q8N8V2 638 aaPredicted RBP18.39■□□□□ 0.53
PDZD8-201ENST00000334464 NONOQ15233 471 aaKnown RBP eCLIP18.39■□□□□ 0.53
PDZD8-201ENST00000334464 ZNF174Q15697 407 aa18.39■□□□□ 0.53
PDZD8-201ENST00000334464 SND1Q7KZF4 910 aaKnown RBP eCLIP18.39■□□□□ 0.53
PDZD8-201ENST00000334464 EIF3CLB5ME19 914 aaKnown RBP18.38■□□□□ 0.53
PDZD8-201ENST00000334464 ABCD1P33897 745 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 GALNT17Q6IS24 598 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 EIF3CQ99613 913 aaKnown RBP18.38■□□□□ 0.53
PDZD8-201ENST00000334464 Q9H521 79 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 MAGEF1Q9HAY2 307 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 ZBTB40Q9NUA8 1239 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 TYW1Q9NV66 732 aaKnown RBP18.38■□□□□ 0.53
PDZD8-201ENST00000334464 HIBADHP31937 336 aaKnown RBP18.38■□□□□ 0.53
PDZD8-201ENST00000334464 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 IPO11Q9UI26 975 aaKnown RBP18.38■□□□□ 0.53
PDZD8-201ENST00000334464 ZNF131P52739 623 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 RSPH3Q86UC2 560 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 C8orf58Q8NAV2 365 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 TRIM58Q8NG06 486 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 ARHGEF2Q92974 986 aaKnown RBP18.38■□□□□ 0.53
PDZD8-201ENST00000334464 SEPT14Q6ZU15 432 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 IP6K1Q92551 441 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 ARHGAP4P98171 946 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 GABPB1Q06547 395 aaPredicted RBP18.38■□□□□ 0.53
PDZD8-201ENST00000334464 CASC4Q6P4E1 433 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 CCDC105Q8IYK2 499 aa18.38■□□□□ 0.53
PDZD8-201ENST00000334464 SOS2Q07890 1332 aaPredicted RBP18.37■□□□□ 0.53
PDZD8-201ENST00000334464 A0A1B0GVL5 298 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 PDE8AO60658 829 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 GCNT3O95395 438 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 PLCD3Q8N3E9 789 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 ATP7AQ04656 1500 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 RFX1P22670 979 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 RABGAP1Q9Y3P9 1069 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 ZNF202O95125 648 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 RIC8AQ9NPQ8 531 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 AFG3L2Q9Y4W6 797 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 XRCC5P13010 732 aaKnown RBP18.37■□□□□ 0.53
PDZD8-201ENST00000334464 SP4Q02446 784 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 BEGAINQ9BUH8 593 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 ZMYM3Q14202 1370 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 CHMP2AO43633 222 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 HARSP12081 509 aaKnown RBP18.37■□□□□ 0.53
PDZD8-201ENST00000334464 SLFN12Q8IYM2 578 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 GPCPD1Q9NPB8 672 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
PDZD8-201ENST00000334464 MGEA5O60502 916 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 EXOC3O60645 756 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 NLRP12P59046 1061 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 ANKRD20A3Q5VUR7 823 aa18.37■□□□□ 0.53
PDZD8-201ENST00000334464 TNNI3KQ59H18 835 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 SMAP1Q8IYB5 467 aaPredicted RBP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 RNF10Q8N5U6 811 aaKnown RBP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 JARID2Q92833 1246 aaPredicted RBP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 ARPP21Q9UBL0 812 aaPredicted RBP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 FPGT-TNNI3KV9GXZ4 949 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 PRPF6O94906 941 aaKnown RBP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 TROVE2P10155 538 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 PPP1R2P3Q6NXS1 205 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 GPAA1O43292 621 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 KRT3P12035 628 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 ITGA6P23229 1130 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 PIK3AP1Q6ZUJ8 805 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 VSIG1Q86XK7 387 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 LPIN2Q92539 896 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 PCP11498 1178 aaKnown RBP18.36■□□□□ 0.53
PDZD8-201ENST00000334464 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 MYCT1Q8N699 235 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 FAN1Q9Y2M0 1017 aa18.36■□□□□ 0.53
PDZD8-201ENST00000334464 TTC36A6NLP5 189 aa18.35■□□□□ 0.53
PDZD8-201ENST00000334464 RNF40O75150 1001 aa18.35■□□□□ 0.53
PDZD8-201ENST00000334464 MAN1A1P33908 653 aa18.35■□□□□ 0.53
PDZD8-201ENST00000334464 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
PDZD8-201ENST00000334464 RSAD2Q8WXG1 361 aa18.35■□□□□ 0.53
PDZD8-201ENST00000334464 HOMER3Q9NSC5 361 aa18.35■□□□□ 0.53
PDZD8-201ENST00000334464 FANCCQ00597 558 aa18.35■□□□□ 0.53
PDZD8-201ENST00000334464 PCDHB13Q9Y5F0 798 aa18.35■□□□□ 0.53
PDZD8-201ENST00000334464 INSRP06213 1382 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms