RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 CDK8P49336 464 aa16.12■□□□□ 0.17
TRAIP-201ENST00000331456 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
TRAIP-201ENST00000331456 PNMA1Q8ND90 353 aa16.12■□□□□ 0.17
TRAIP-201ENST00000331456 IL17RBQ9NRM6 502 aa16.12■□□□□ 0.17
TRAIP-201ENST00000331456 MYH6P13533 1939 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 CAVIN2O95810 425 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 CMA1P23946 247 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 GNAQP50148 359 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 PKN1Q16512 942 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 CERS5Q8N5B7 392 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 MRVI1Q9Y6F6 885 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 CNTNAP5Q8WYK1 1306 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 DDX60LQ5H9U9 1706 aaKnown RBP16.11■□□□□ 0.17
TRAIP-201ENST00000331456 KRT2P35908 639 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 PTPAQ15257 358 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 HHIPL2Q6UWX4 724 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 FMR1NBQ8N0W7 255 aaPredicted RBP16.11■□□□□ 0.17
TRAIP-201ENST00000331456 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
TRAIP-201ENST00000331456 SLC44A5Q8NCS7 719 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 TEKT1Q969V4 418 aa16.11■□□□□ 0.17
TRAIP-201ENST00000331456 A0A1B0GVL5 298 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 USP17L3A6NCW0 530 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 USP17L4A6NCW7 530 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 MARCKSP29966 332 aaPredicted RBP16.1■□□□□ 0.17
TRAIP-201ENST00000331456 BAG6P46379 1132 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 HS1BP3Q53T59 392 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 AXDND1Q5T1B0 1012 aaPredicted RBP16.1■□□□□ 0.17
TRAIP-201ENST00000331456 CC2D2BQ6DHV5 1058 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 USP17L1Q7RTZ2 530 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 PHF20Q9BVI0 1012 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.1■□□□□ 0.17
TRAIP-201ENST00000331456 VPS54Q9P1Q0 977 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 CEP131Q9UPN4 1083 aa16.1■□□□□ 0.17
TRAIP-201ENST00000331456 CUTAO60888 179 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 NDUFA8P51970 172 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 FKBP1AP62942 108 aaKnown RBP16.09■□□□□ 0.17
TRAIP-201ENST00000331456 GRM4Q14833 912 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 SUPT20HQ8NEM7 779 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 NEDD1Q8NHV4 660 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 DBNDD1Q9H9R9 158 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 USP40Q9NVE5 1235 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 MYH1P12882 1939 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 CHRNA5P30532 468 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 ANO6Q4KMQ2 910 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
TRAIP-201ENST00000331456 SCG2P13521 617 aa16.08■□□□□ 0.16
TRAIP-201ENST00000331456 SCNN1DP51172 638 aa16.08■□□□□ 0.16
TRAIP-201ENST00000331456 NR5A1Q13285 461 aa16.08■□□□□ 0.16
TRAIP-201ENST00000331456 PICALMQ13492 652 aa16.08■□□□□ 0.16
TRAIP-201ENST00000331456 STRIP1Q5VSL9 837 aa16.08■□□□□ 0.16
TRAIP-201ENST00000331456 LZTS2Q9BRK4 669 aa16.08■□□□□ 0.16
TRAIP-201ENST00000331456 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
TRAIP-201ENST00000331456 hCG_1642624A0A1W2PR95 340 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 ECE2O60344 883 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 WDHD1O75717 1129 aaPredicted RBP16.07■□□□□ 0.16
TRAIP-201ENST00000331456 STX1AQ16623 288 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 PFKFB3Q16875 520 aaPredicted RBP16.07■□□□□ 0.16
TRAIP-201ENST00000331456 KRI1Q8N9T8 703 aaKnown RBP16.07■□□□□ 0.16
TRAIP-201ENST00000331456 OXER1Q8TDS5 423 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 MXD3Q9BW11 206 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 MRIQ9BWK5 157 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
TRAIP-201ENST00000331456 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 SLX4Q8IY92 1834 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 PFKFB1P16118 471 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 CABP5Q9NP86 173 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 CCDC39Q9UFE4 941 aa16.07■□□□□ 0.16
TRAIP-201ENST00000331456 ESPNB1AK53 854 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 ZNF202O95125 648 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 CRKP46108 304 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 TOB1P50616 345 aaPredicted RBP16.06■□□□□ 0.16
TRAIP-201ENST00000331456 NLRP5P59047 1200 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 ZRSR1Q15695 479 aaKnown RBP16.06■□□□□ 0.16
TRAIP-201ENST00000331456 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 TIGD1Q96MW7 591 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 SWAP70Q9UH65 585 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 BMP15O95972 392 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 TOP1P11387 765 aaKnown RBP16.06■□□□□ 0.16
TRAIP-201ENST00000331456 CALML3P27482 149 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 SYKP43405 635 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 HDLBPQ00341 1268 aaKnown RBP16.06■□□□□ 0.16
TRAIP-201ENST00000331456 RESP18Q5W5W9 173 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 CDC42EP5Q6NZY7 148 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 ANO10Q9NW15 660 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 MAD2L2Q9UI95 211 aa16.06■□□□□ 0.16
TRAIP-201ENST00000331456 FAM237AA0A1B0GTK4 181 aa16.05■□□□□ 0.16
TRAIP-201ENST00000331456 TRIM75PA6NK02 468 aa16.05■□□□□ 0.16
TRAIP-201ENST00000331456 HLA-DOAP06340 250 aa16.05■□□□□ 0.16
TRAIP-201ENST00000331456 ZNF165P49910 485 aa16.05■□□□□ 0.16
TRAIP-201ENST00000331456 C7orf43Q8WVR3 580 aa16.05■□□□□ 0.16
TRAIP-201ENST00000331456 ZDHHC15Q96MV8 337 aa16.05■□□□□ 0.16
TRAIP-201ENST00000331456 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
TRAIP-201ENST00000331456 PLIN4Q96Q06 1357 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms