RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 DIS3L2Q8IYB7 885 aaKnown RBP19.61■□□□□ 0.73
DDX41-201ENST00000330503 CTCFLQ8NI51 663 aaPredicted RBP19.61■□□□□ 0.73
DDX41-201ENST00000330503 KAT14Q9H8E8 782 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 SCN9AQ15858 1988 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 FKBP1AP62942 108 aaKnown RBP19.61■□□□□ 0.73
DDX41-201ENST00000330503 AKAP17AQ02040 695 aaKnown RBP19.61■□□□□ 0.73
DDX41-201ENST00000330503 PICALMQ13492 652 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 SF3A1Q15459 793 aaKnown RBP19.61■□□□□ 0.73
DDX41-201ENST00000330503 NOSTRINQ8IVI9 506 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 PPP1R9BQ96SB3 815 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 TNMDQ9H2S6 317 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 ZNF287Q9HBT7 754 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 CNTNAP5Q8WYK1 1306 aa19.61■□□□□ 0.73
DDX41-201ENST00000330503 A0A1W2PQ27 194 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 A0A1W2PQ64 194 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 A0A1W2PQD8 194 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 PTPAQ15257 358 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 SAFBQ15424 915 aaKnown RBP eCLIP19.6■□□□□ 0.73
DDX41-201ENST00000330503 AOC3Q16853 763 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 CC2D2BQ6DHV5 1058 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 PNMA1Q8ND90 353 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 NEDD1Q8NHV4 660 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 OXER1Q8TDS5 423 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 TEKT1Q969V4 418 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 MRIQ9BWK5 157 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 FOXP1Q9H334 677 aaPredicted RBP19.6■□□□□ 0.73
DDX41-201ENST00000330503 ZNF646O15015 1829 aaPredicted RBP19.6■□□□□ 0.73
DDX41-201ENST00000330503 C21orf2O43822 256 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 CRKP46108 304 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 AXDND1Q5T1B0 1012 aaPredicted RBP19.6■□□□□ 0.73
DDX41-201ENST00000330503 FSIP1Q8NA03 581 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 TMEM47Q9BQJ4 181 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 VPS54Q9P1Q0 977 aa19.6■□□□□ 0.73
DDX41-201ENST00000330503 TOB1P50616 345 aaPredicted RBP19.59■□□□□ 0.73
DDX41-201ENST00000330503 GABPAQ06546 454 aa19.59■□□□□ 0.73
DDX41-201ENST00000330503 KIAA2012Q0VF49 1180 aa19.59■□□□□ 0.73
DDX41-201ENST00000330503 CKAP2LQ8IYA6 745 aa19.59■□□□□ 0.73
DDX41-201ENST00000330503 PHF20Q9BVI0 1012 aa19.59■□□□□ 0.73
DDX41-201ENST00000330503 KCNA3P22001 575 aa19.58■□□□□ 0.73
DDX41-201ENST00000330503 NR5A1Q13285 461 aa19.58■□□□□ 0.73
DDX41-201ENST00000330503 GRM4Q14833 912 aa19.58■□□□□ 0.73
DDX41-201ENST00000330503 STAG2Q8N3U4 1231 aa19.58■□□□□ 0.73
DDX41-201ENST00000330503 PCDHAC2Q9Y5I4 1007 aa19.58■□□□□ 0.73
DDX41-201ENST00000330503 VEGFAP15692 232 aaPredicted RBP19.58■□□□□ 0.72
DDX41-201ENST00000330503 FAM160A1Q05DH4 1040 aa19.58■□□□□ 0.72
DDX41-201ENST00000330503 KIAA0825Q8IV33 1275 aa19.58■□□□□ 0.72
DDX41-201ENST00000330503 FMR1NBQ8N0W7 255 aaPredicted RBP19.58■□□□□ 0.72
DDX41-201ENST00000330503 MRPS27Q92552 414 aaKnown RBP19.58■□□□□ 0.72
DDX41-201ENST00000330503 ZDHHC15Q96MV8 337 aa19.58■□□□□ 0.72
DDX41-201ENST00000330503 KIF5BP33176 963 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 CCDC173Q0VFZ6 552 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 CCDC73Q6ZRK6 1079 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 SLC16A10Q8TF71 515 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 MAD2L2Q9UI95 211 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 A0A1B0GVL5 298 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 MARCKSP29966 332 aaPredicted RBP19.57■□□□□ 0.72
DDX41-201ENST00000330503 NOVP48745 357 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 SLC35G1Q2M3R5 365 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 TTLL6Q8N841 843 aa19.57■□□□□ 0.72
DDX41-201ENST00000330503 PPP6R2O75170 966 aa19.56■□□□□ 0.72
DDX41-201ENST00000330503 CCDC192P0DO97 292 aa19.56■□□□□ 0.72
DDX41-201ENST00000330503 DPEP1P16444 411 aa19.56■□□□□ 0.72
DDX41-201ENST00000330503 NDUFA8P51970 172 aa19.56■□□□□ 0.72
DDX41-201ENST00000330503 HDLBPQ00341 1268 aaKnown RBP19.56■□□□□ 0.72
DDX41-201ENST00000330503 NPY5RQ15761 445 aa19.56■□□□□ 0.72
DDX41-201ENST00000330503 SUPT20HQ8NEM7 779 aa19.56■□□□□ 0.72
DDX41-201ENST00000330503 OSBPL5Q9H0X9 879 aaPredicted RBP19.56■□□□□ 0.72
DDX41-201ENST00000330503 STX8Q9UNK0 236 aa19.56■□□□□ 0.72
DDX41-201ENST00000330503 BAZ2BQ9UIF8 2168 aaKnown RBP19.56■□□□□ 0.72
DDX41-201ENST00000330503 YDJCA8MPS7 323 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 XBP1P17861 261 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 TYRO3Q06418 890 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 NFIAQ12857 509 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 UVSSAQ2YD98 709 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 ZFPM1Q8IX07 1006 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.55■□□□□ 0.72
DDX41-201ENST00000330503 MRVI1Q9Y6F6 885 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 PALM3A6NDB9 673 aaPredicted RBP19.55■□□□□ 0.72
DDX41-201ENST00000330503 CMA1P23946 247 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 PFKFB3Q16875 520 aaPredicted RBP19.55■□□□□ 0.72
DDX41-201ENST00000330503 ANP32BQ92688 251 aaKnown RBP19.55■□□□□ 0.72
DDX41-201ENST00000330503 CEP95Q96GE4 821 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 PDLIM2Q96JY6 352 aa19.55■□□□□ 0.72
DDX41-201ENST00000330503 SCG2P13521 617 aa19.54■□□□□ 0.72
DDX41-201ENST00000330503 PPIP5K2O43314 1243 aa19.54■□□□□ 0.72
DDX41-201ENST00000330503 EARS2Q5JPH6 523 aaKnown RBP19.54■□□□□ 0.72
DDX41-201ENST00000330503 PIBF1Q8WXW3 757 aa19.54■□□□□ 0.72
DDX41-201ENST00000330503 TNFRSF25Q93038 417 aa19.54■□□□□ 0.72
DDX41-201ENST00000330503 CABP5Q9NP86 173 aa19.54■□□□□ 0.72
DDX41-201ENST00000330503 FAM205CA6NFA0 338 aa19.53■□□□□ 0.72
DDX41-201ENST00000330503 KRT2P35908 639 aa19.53■□□□□ 0.72
DDX41-201ENST00000330503 GNAQP50148 359 aa19.53■□□□□ 0.72
DDX41-201ENST00000330503 RILPL1Q5EBL4 403 aa19.53■□□□□ 0.72
DDX41-201ENST00000330503 IGKV6D-41A0A0C4DH26 115 aa19.52■□□□□ 0.72
DDX41-201ENST00000330503 CTAGE5O15320 804 aa19.52■□□□□ 0.72
DDX41-201ENST00000330503 KINO60870 393 aaKnown RBP19.52■□□□□ 0.72
DDX41-201ENST00000330503 TOP1P11387 765 aaKnown RBP19.52■□□□□ 0.72
DDX41-201ENST00000330503 AKR1B1P15121 316 aa19.52■□□□□ 0.72
DDX41-201ENST00000330503 GRIPAP1Q4V328 841 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms