RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 DUX4L2P0CJ85 424 aa7□□□□□ -1.29
SSH1-202ENST00000326495 DUX4L3P0CJ86 424 aa7□□□□□ -1.29
SSH1-202ENST00000326495 DUX4L4P0CJ87 422 aa7□□□□□ -1.29
SSH1-202ENST00000326495 DUX4L5P0CJ88 424 aa7□□□□□ -1.29
SSH1-202ENST00000326495 DUX4L6P0CJ89 424 aa7□□□□□ -1.29
SSH1-202ENST00000326495 DUX4L7P0CJ90 424 aa7□□□□□ -1.29
SSH1-202ENST00000326495 MRPL50Q8N5N7 158 aaKnown RBP7□□□□□ -1.29
SSH1-202ENST00000326495 THUMPD2Q9BTF0 503 aaKnown RBP7□□□□□ -1.29
SSH1-202ENST00000326495 DUX4Q9UBX2 424 aa7□□□□□ -1.29
SSH1-202ENST00000326495 WDR62O43379 1518 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 GOLGA8JA6NMD2 632 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 HPDP32754 393 aaPredicted RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 GIMAP4Q9NUV9 329 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 OAS2P29728 719 aaKnown RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 CEP85Q6P2H3 762 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 CSRNP1Q96S65 589 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 GOLGA8TH3BQL2 631 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 DEXIO95424 95 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 LMNAP02545 664 aaKnown RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 GOLGA8HP0CJ92 632 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ST5P78524 1137 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ANKRD20A3Q5VUR7 823 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 LDHAL6AQ6ZMR3 332 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 KDM2BQ8NHM5 1336 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 KDM5CP41229 1560 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 RAPGEF3O95398 923 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 RPS6KB1P23443 525 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 EIF3BP55884 814 aaKnown RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 ESRRGP62508 458 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ITIH3Q06033 890 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 NSMCE1Q8WV22 266 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 NUTM2BA6NNL0 878 aaPredicted RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 NUTM2EB1AL46 878 aaPredicted RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 F6X3S4 739 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 NLRP12P59046 1061 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 IGBP1P78318 339 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 KCNH3Q9ULD8 1083 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 BPIFB4P59827 614 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ANKRD13DQ6ZTN6 518 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 LRRC43Q8N309 656 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ARHGEF2Q92974 986 aaKnown RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 ADAMTS12P58397 1594 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 FLT4P35916 1363 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ERCC3P19447 782 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 IFNL2Q8IZJ0 200 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 BICRAQ9NZM4 1560 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 GOLGA8MH3BSY2 632 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 SART1O43290 800 aaKnown RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 TMCO4Q5TGY1 634 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
SSH1-202ENST00000326495 HEATR3Q7Z4Q2 680 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 NECAB1Q8N987 351 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 LINS1Q8NG48 757 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 CABS1Q96KC9 395 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 HAND2P61296 217 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 PLCB3Q01970 1234 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ANO1Q5XXA6 986 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 STX8Q9UNK0 236 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 CTNND2Q9UQB3 1225 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ASXL2Q76L83 1435 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 RIMS2Q9UQ26 1411 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 NR1H3Q13133 447 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 PDXDC1Q6P996 788 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 CDC37L1Q7L3B6 337 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 ZKSCAN3Q9BRR0 538 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 SAR1BQ9Y6B6 198 aa6.99□□□□□ -1.29
SSH1-202ENST00000326495 FAM135BQ49AJ0 1406 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 MYH13Q9UKX3 1938 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 TNNI2P48788 182 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 PAK1Q13153 545 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 POSTNQ15063 836 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.98□□□□□ -1.291e-6■■■■■ 56.2
SSH1-202ENST00000326495 METTL14Q9HCE5 456 aaKnown RBP6.98□□□□□ -1.29
SSH1-202ENST00000326495 RBM6P78332 1123 aaKnown RBP6.98□□□□□ -1.29
SSH1-202ENST00000326495 KARSQ15046 597 aaKnown RBP6.98□□□□□ -1.29
SSH1-202ENST00000326495 KLHL14Q9P2G3 628 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 CARMIL3Q8ND23 1372 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 HNRNPCL1O60812 293 aaKnown RBP6.98□□□□□ -1.29
SSH1-202ENST00000326495 RLBP1P12271 317 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 MUM1Q2TAK8 710 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 KSR2Q6VAB6 950 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 KIFC3Q9BVG8 833 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 CITO14578 2027 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 E7EVH7 732 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 KRT3P12035 628 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 CHMLP26374 656 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 SNCBQ16143 134 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 TTC25Q96NG3 672 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 NOC4LQ9BVI4 516 aaKnown RBP6.98□□□□□ -1.29
SSH1-202ENST00000326495 DMTNQ08495 405 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 AOC3Q16853 763 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 C14orf93Q9H972 538 aaKnown RBP6.98□□□□□ -1.29
SSH1-202ENST00000326495 ANGEL1Q9UNK9 670 aaKnown RBP6.98□□□□□ -1.29
SSH1-202ENST00000326495 ZNF202O95125 648 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 FANCCQ00597 558 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 EFCAB13Q8IY85 973 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 YEATS2Q9ULM3 1422 aa6.98□□□□□ -1.29
SSH1-202ENST00000326495 TRAPPC10P48553 1259 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms