RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 KIF28PB7ZC32 967 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 PROS1P07225 676 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 MIGA2Q7L4E1 593 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 NUP133Q8WUM0 1156 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 ZDHHC15Q96MV8 337 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 FLRT1Q9NZU1 646 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 CTNNA3Q9UI47 895 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 PRR5-ARHGAP8B1AHC4 643 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 PCCAP05165 728 aaPredicted RBP8.52□□□□□ -1.05
CSTF3-201ENST00000323959 ARHGAP8P85298 464 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 MCM10Q7L590 875 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 CWC22Q9HCG8 908 aaKnown RBP8.52□□□□□ -1.05
CSTF3-201ENST00000323959 GVINP1Q7Z2Y8 2422 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 CACNA1HO95180 2353 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 FASNP49327 2511 aaKnown RBP8.52□□□□□ -1.05
CSTF3-201ENST00000323959 SALL1Q9NSC2 1324 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 KLRK1P26718 216 aa8.52□□□□□ -1.05
CSTF3-201ENST00000323959 CBX2Q14781 532 aaPredicted RBP8.52□□□□□ -1.05
CSTF3-201ENST00000323959 DBF4Q9UBU7 674 aaPredicted RBP8.52□□□□□ -1.05
CSTF3-201ENST00000323959 ANKRD11Q6UB99 2663 aaPredicted RBP8.51□□□□□ -1.05
CSTF3-201ENST00000323959 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
CSTF3-201ENST00000323959 TEKT1Q969V4 418 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 HAUS7Q99871 368 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 ANKFY1Q9P2R3 1169 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 ZNF292O60281 2723 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 SIP14410 1827 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 MAST3O60307 1309 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 ELP1O95163 1332 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 CDK7P50613 346 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 CCNA1P78396 465 aa8.51□□□□□ -1.05
CSTF3-201ENST00000323959 SMAD4Q13485 552 aaKnown RBP8.51□□□□□ -1.05
CSTF3-201ENST00000323959 ZGPATQ8N5A5 531 aaKnown RBP8.51□□□□□ -1.05
CSTF3-201ENST00000323959 PTPREP23469 700 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 HOXA7P31268 230 aaPredicted RBP8.5□□□□□ -1.05
CSTF3-201ENST00000323959 IGHMBP2P38935 993 aaKnown RBP8.5□□□□□ -1.05
CSTF3-201ENST00000323959 ERVK-9P63128 1117 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 ERVK-24P63145 666 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 IRX3P78415 501 aaPredicted RBP8.5□□□□□ -1.05
CSTF3-201ENST00000323959 SEZ6LQ9BYH1 1024 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 CERS4Q9HA82 394 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 STARD7Q9NQZ5 370 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 TAF4O00268 1085 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 ATXN1P54253 815 aaKnown RBP8.5□□□□□ -1.05
CSTF3-201ENST00000323959 MAP3K10Q02779 954 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 MFSD14BQ5SR56 506 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 ACTN1P12814 892 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 GRB14Q14449 540 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 LRSAM1Q6UWE0 723 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 XPNPEP3Q9NQH7 507 aa8.5□□□□□ -1.05
CSTF3-201ENST00000323959 ASH1LQ9NR48 2969 aaKnown RBP8.49□□□□□ -1.05
CSTF3-201ENST00000323959 TRIM75PA6NK02 468 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 LOC730098B7Z3J9 87 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 STXBP3O00186 592 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 RARBP10826 455 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 CTSWP56202 376 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 SHC2P98077 582 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 PTPROQ16827 1216 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 OTOP2Q7RTS6 562 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 BORCS6Q96GS4 357 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 USP34Q70CQ2 3546 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 TRANK1O15050 2925 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 CDH23Q9H251 3354 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 ERVK-21P61565 698 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 GDPD5Q8WTR4 605 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 RUBCNQ92622 972 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 RIPOR3Q96MK2 946 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 ANGPTL2Q9UKU9 493 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 SUGT1Q9Y2Z0 365 aa8.49□□□□□ -1.05
CSTF3-201ENST00000323959 ZFHX4Q86UP3 3567 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 MAST4O15021 2626 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 MBTPS2O43462 519 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 CYP2C19P33261 490 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 HERVK_113P62684 666 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 ZBBXA8MT70 800 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 H3BQ06 376 aaPredicted RBP8.48□□□□□ -1.05
CSTF3-201ENST00000323959 AIMP1Q12904 312 aaKnown RBP8.48□□□□□ -1.05
CSTF3-201ENST00000323959 NCBP3Q53F19 620 aaKnown RBP8.48□□□□□ -1.05
CSTF3-201ENST00000323959 KCNG4Q8TDN1 519 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 TBC1D22AQ8WUA7 517 aa8.48□□□□□ -1.05
CSTF3-201ENST00000323959 LRRFIP2Q9Y608 721 aaKnown RBP8.48□□□□□ -1.05
CSTF3-201ENST00000323959 RIF1Q5UIP0 2472 aaKnown RBP8.48□□□□□ -1.05
CSTF3-201ENST00000323959 A0A0U1RQG5 324 aaPredicted RBP8.47□□□□□ -1.05
CSTF3-201ENST00000323959 TMEM8BA6NDV4 472 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 ACLYP53396 1101 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 CACNB3P54284 484 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 FAM47AQ5JRC9 791 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 PRR23BQ6ZRT6 265 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 HERC6Q8IVU3 1022 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 MRPL38Q96DV4 380 aaKnown RBP8.47□□□□□ -1.05
CSTF3-201ENST00000323959 PHACTR3Q96KR7 559 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 RBPJLQ9UBG7 517 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 RALGAPA2Q2PPJ7 1873 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 LMNB2Q03252 620 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 HHIPL2Q6UWX4 724 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 FAM126BQ8IXS8 530 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 CCDC191Q8NCU4 936 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms