RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 URI1O94763 535 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 HSPA6P17066 643 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 MCCP23508 829 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 EVCP57679 992 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 TCP10Q12799 353 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 DLGAP5Q15398 846 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 STRIP1Q5VSL9 837 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 TTC6Q86TZ1 520 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 SULF1Q8IWU6 871 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 DCPSQ96C86 337 aaKnown RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 CALR3Q96L12 384 aaKnown RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 PRMT6Q96LA8 375 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-201ENST00000318023 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
CAPN3-201ENST00000318023 MAP4K4O95819 1239 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 SLURP2P0DP57 97 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 RASGRF1Q13972 1273 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 CFAP100Q494V2 611 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 CEP120Q8N960 986 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 KAT2BQ92831 832 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 EAF2Q96CJ1 260 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 SLC24A3Q9HC58 644 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 GOLGA6L19H0YKK7 550 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 WNT10BO00744 389 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 MCM6Q14566 821 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 TTC39AQ5SRH9 613 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 SMC3Q9UQE7 1217 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 CACNA1FO60840 1977 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 N4BP1O75113 896 aaKnown RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 PHACTR2O75167 634 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 TADA3O75528 432 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 IFIT2P09913 472 aaKnown RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 TADA2BQ86TJ2 420 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 FAM177A1Q8N128 213 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 SSH3Q8TE77 659 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 CEP89Q96ST8 783 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 SRRTQ9BXP5 876 aaKnown RBP10.75□□□□□ -0.69
CAPN3-201ENST00000318023 ARFGAP3Q9NP61 516 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 PSD3Q9NYI0 1048 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 RAI14Q9P0K7 980 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 ATP6V1DQ9Y5K8 247 aa10.75□□□□□ -0.69
CAPN3-201ENST00000318023 TNNI3KQ59H18 835 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 TTC19Q6DKK2 380 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-201ENST00000318023 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
CAPN3-201ENST00000318023 FUT8Q9BYC5 575 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 PDE11AQ9HCR9 933 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 FPGT-TNNI3KV9GXZ4 949 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 SCN9AQ15858 1988 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 NEMFO60524 1076 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 LIG3P49916 1009 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 FBXW10Q5XX13 1052 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 FBXO33Q7Z6M2 555 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 ESYT1Q9BSJ8 1104 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 HDAC9Q9UKV0 1011 aa10.74□□□□□ -0.69
CAPN3-201ENST00000318023 IDH1O75874 414 aaKnown RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 CPA1P15085 419 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 FGFR2P21802 821 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 MAP9Q49MG5 647 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 C11orf57Q6ZUT1 292 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 RHPN1Q8TCX5 695 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 GNL3LQ9NVN8 582 aaKnown RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 LRP2BPQ9P2M1 347 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 DBNLQ9UJU6 430 aaKnown RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 FANCGO15287 622 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 HMMRO75330 724 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 CHGBP05060 677 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 IBSPP21815 317 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 PICALMQ13492 652 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 RILPL2Q969X0 211 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 SH3BP1Q9Y3L3 701 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 GOLGA6L4A6NEF3 574 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 LARGE1O95461 756 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 ITGBL1O95965 494 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 ZRSR1Q15695 479 aaKnown RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 NBPF20Q3BBV1 942 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 CCDC158Q5M9N0 1113 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 CYP4F22Q6NT55 531 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 DZIP1Q86YF9 867 aaKnown RBP10.73□□□□□ -0.69
CAPN3-201ENST00000318023 DPF2Q92785 391 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 TSKSQ9UJT2 592 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
CAPN3-201ENST00000318023 CCDC196A0A1B0GTZ2 297 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 PPP1R12AO14974 1030 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-201ENST00000318023 NR1I2O75469 434 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 CIAO1O76071 339 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 SMC2O95347 1197 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 GJB2P29033 226 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 CDC25BP30305 580 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 POLA2Q14181 598 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 DHX8Q14562 1220 aaKnown RBP10.72□□□□□ -0.69
CAPN3-201ENST00000318023 LRRC31Q6UY01 552 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 USP50Q70EL3 339 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-201ENST00000318023 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 EFCAB13Q8IY85 973 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
CAPN3-201ENST00000318023 MTMR6Q9Y217 621 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms