RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 POSTNQ15063 836 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 SFMBT2Q5VUG0 894 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 PRPF38AQ8NAV1 312 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 ANKFY1Q9P2R3 1169 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 CYP7A1P22680 504 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 CHMLP26374 656 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 LZTS1Q9Y250 596 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 PDS5BQ9NTI5 1447 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 LETM2Q2VYF4 491 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 FOXD4Q12950 439 aaPredicted RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 KCNV2Q8TDN2 545 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 PMS1P54277 932 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 HNRNPH2P55795 449 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 HDLBPQ00341 1268 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 MMEL1Q495T6 779 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 CNNM4Q6P4Q7 775 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 LDHAL6AQ6ZMR3 332 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 PHKBQ93100 1093 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 SLCO1A2P46721 670 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 DNAJC6O75061 913 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 HNRNPCP07910 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
USF3-201ENST00000316407 ACTN3Q08043 901 aaPredicted RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 NBPF10Q6P3W6 841 aaKnown RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 MAEAQ7L5Y9 396 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 MYO1CO00159 1063 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 DAPK3O43293 454 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 ANO1Q5XXA6 986 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 POMGNT1Q8WZA1 660 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 SMYD2Q9NRG4 433 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 ATG3Q9NT62 314 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 ATF7P17544 494 aaPredicted RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 MMS22LQ6ZRQ5 1243 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 TTLL11Q8NHH1 800 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 SYF2O95926 243 aaKnown RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 CCDC92Q53HC0 331 aaPredicted RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 SV2BQ7L1I2 683 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 TBK1Q9UHD2 729 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 PIK3AP1Q6ZUJ8 805 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 TEKT1Q969V4 418 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 SDCCAG3Q96C92 435 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 RRP36Q96EU6 259 aaKnown RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 NBPF3Q9H094 633 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 WAPLQ7Z5K2 1190 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 RMDN2Q96LZ7 410 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 ZNF652Q9Y2D9 606 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 STX10O60499 249 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 CXCR5P32302 372 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 RALGAPBQ86X10 1494 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 KCNJ18B7U540 433 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 MAP3K7O43318 606 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 GNL1P36915 607 aaPredicted RBP9.63□□□□□ -0.87
USF3-201ENST00000316407 KCNJ12Q14500 433 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 ZNF449Q6P9G9 518 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 MSANTD4Q8NCY6 345 aa9.63□□□□□ -0.87
USF3-201ENST00000316407 SUN1O94901 812 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 ZNF827Q17R98 1081 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 KRT79Q5XKE5 535 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 FBXO38Q6PIJ6 1188 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 RINLQ6ZS11 566 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 ARMC9Q7Z3E5 817 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 MAML1Q92585 1016 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 RNF34Q969K3 372 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 C2orf54Q08AI8 447 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 HP1BP3Q5SSJ5 553 aaPredicted RBP9.62□□□□□ -0.87
USF3-201ENST00000316407 LRRC8CQ8TDW0 803 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 NLRC4Q9NPP4 1024 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 LIN9Q5TKA1 542 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 NAA35Q5VZE5 725 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 OTUD7BQ6GQQ9 843 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 NME9Q86XW9 330 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 GAPVD1Q14C86 1478 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 CTNND1O60716 968 aaKnown RBP9.62□□□□□ -0.87
USF3-201ENST00000316407 DNAJC8O75937 253 aaPredicted RBP9.62□□□□□ -0.87
USF3-201ENST00000316407 TNFAIP3P21580 790 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 WDR44Q5JSH3 913 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 KLHL30Q0D2K2 578 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 TSPY1Q01534 308 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 U2AF1L4Q8WU68 220 aaKnown RBP9.62□□□□□ -0.87
USF3-201ENST00000316407 SUFUQ9UMX1 484 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 A0A087WWV3 80 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 SART1O43290 800 aaKnown RBP9.62□□□□□ -0.87
USF3-201ENST00000316407 STK10O94804 968 aaKnown RBP9.62□□□□□ -0.87
USF3-201ENST00000316407 GSTA1P08263 222 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 GSTA2P09210 222 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 SLC7A5Q01650 507 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 VWA3BQ502W6 1294 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 ZBTB41Q5SVQ8 909 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 PRDM11Q9NQV5 511 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 WWC3Q9ULE0 1092 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 FLOT1O75955 427 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 RSAD2Q8WXG1 361 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 INTS9Q9NV88 658 aaKnown RBP9.62□□□□□ -0.87
USF3-201ENST00000316407 ORC6Q9Y5N6 252 aa9.62□□□□□ -0.87
USF3-201ENST00000316407 DYTNA2CJ06 578 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 315.7 ms