RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PRKCZQ05513 592 aa17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 SBK1Q52WX2 424 aa17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 KIAA1755Q5JYT7 1200 aa17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 GIMAP6Q6P9H5 292 aa17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 CLEC10AQ8IUN9 316 aa17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 SMCR8Q8TEV9 937 aaPredicted RBP17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 VCAM1P19320 739 aa17.54■□□□□ 0.4
PPP1CA-201ENST00000312989 KIF22Q14807 665 aa17.54■□□□□ 0.4
PPP1CA-201ENST00000312989 ARHGEF6Q15052 776 aa17.54■□□□□ 0.4
PPP1CA-201ENST00000312989 USP17L2Q6R6M4 530 aa17.54■□□□□ 0.4
PPP1CA-201ENST00000312989 SH3TC2Q8TF17 1288 aa17.54■□□□□ 0.4
PPP1CA-201ENST00000312989 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
PPP1CA-201ENST00000312989 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
PPP1CA-201ENST00000312989 CNMDO75829 334 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 GCLCP48506 637 aaPredicted RBP17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 FCGRTP55899 365 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 HERVK_113P62684 666 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 NUCB1Q02818 461 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.47e-45■■■■■ 68.6
PPP1CA-201ENST00000312989 TMEM179Q6ZVK1 233 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 TMOD4Q9NZQ9 345 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 MYPNQ86TC9 1320 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 BAZ2AQ9UIF9 1905 aaKnown RBP17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 MLLT1Q03111 559 aaPredicted RBP17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 ZYXQ15942 572 aaKnown RBP17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 FSD1Q9BTV5 496 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 CABP5Q9NP86 173 aa17.53■□□□□ 0.4
PPP1CA-201ENST00000312989 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.39
PPP1CA-201ENST00000312989 SLC9C1Q4G0N8 1177 aa17.52■□□□□ 0.39
PPP1CA-201ENST00000312989 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.39
PPP1CA-201ENST00000312989 CHD1LQ86WJ1 897 aa17.52■□□□□ 0.39
PPP1CA-201ENST00000312989 PLEKHM2Q8IWE5 1019 aa17.52■□□□□ 0.39
PPP1CA-201ENST00000312989 OSBPL3Q9H4L5 887 aa17.52■□□□□ 0.39
PPP1CA-201ENST00000312989 GREB1LQ9C091 1923 aaPredicted RBP17.52■□□□□ 0.39
PPP1CA-201ENST00000312989 RASA1P20936 1047 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 FLT3LGP49771 235 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 IRX3P78415 501 aaPredicted RBP17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 IRF5Q13568 498 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 Q3C1V9 767 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 LBX2Q6XYB7 198 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 CCDC129Q6ZRS4 1044 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 IFNL3Q8IZI9 196 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 CCDC17Q96LX7 622 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 FEZ1Q99689 392 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 GJD2Q9UKL4 321 aa17.51■□□□□ 0.39
PPP1CA-201ENST00000312989 IGKV6D-41A0A0C4DH26 115 aa17.5■□□□□ 0.39
PPP1CA-201ENST00000312989 PATL2C9JE40 543 aaKnown RBP17.5■□□□□ 0.39
PPP1CA-201ENST00000312989 TNPO2O14787 897 aaKnown RBP17.5■□□□□ 0.39
PPP1CA-201ENST00000312989 GNAT2P19087 354 aa17.5■□□□□ 0.39
PPP1CA-201ENST00000312989 USP14P54578 494 aa17.5■□□□□ 0.39
PPP1CA-201ENST00000312989 MTFR1Q15390 333 aa17.5■□□□□ 0.39
PPP1CA-201ENST00000312989 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
PPP1CA-201ENST00000312989 SPDYE16A6NNV3 312 aaPredicted RBP17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L15C9J2P7 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L13C9JLJ4 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L11C9JVI0 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L18D6R9N7 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L22D6RA61 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L17D6RBQ6 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L19D6RCP7 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L20D6RJB6 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 MPHOSPH10O00566 681 aaKnown RBP17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 HOXD10P28358 340 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 GRK4P32298 578 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 USP17L24Q0WX57 530 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 VPS53Q5VIR6 699 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 PORCNQ9H237 461 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 MGAMO43451 1857 aa17.49■□□□□ 0.39
PPP1CA-201ENST00000312989 A0A0D9SFI3 127 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 EN2P19622 333 aaPredicted RBP17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 PDE4AP27815 886 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 ERVK-24P63145 666 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 ICA1Q05084 483 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 SHISA4Q96DD7 197 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 BTBD7Q9P203 1132 aa17.48■□□□□ 0.39
PPP1CA-201ENST00000312989 A0A0G2JMZ2 1700 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 EEF2P13639 858 aaKnown RBP17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 LRRFIP1Q32MZ4 808 aaKnown RBP17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 GPRC5AQ8NFJ5 357 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 RAET1EQ8TD07 263 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 PXYLP1Q8TE99 480 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 USP6NLQ92738 828 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 DDRGK1Q96HY6 314 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 RLFQ13129 1914 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
PPP1CA-201ENST00000312989 MINDY4BA8MYZ0 360 aa17.46■□□□□ 0.39
PPP1CA-201ENST00000312989 ELNP15502 786 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms