RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CABP5Q9NP86 173 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 MCM6Q14566 821 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 ALKQ9UM73 1620 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 KIF1CO43896 1103 aaKnown RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 HOMER2Q9NSB8 354 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 ZMYM6O95789 1325 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 LMO7Q8WWI1 1683 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 GKAP1Q5VSY0 366 aaPredicted RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 LRRC8AQ8IWT6 810 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 DHTKD1Q96HY7 919 aaPredicted RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 TRMT112Q9UI30 125 aaKnown RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 CIB2O75838 187 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 RNF187Q5TA31 235 aaPredicted RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 GFM2Q969S9 779 aaKnown RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 SYTL4Q96C24 671 aaPredicted RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 C19orf44Q9H6X5 657 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 COPRSQ9NQ92 184 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 IFNKQ9P0W0 207 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 NDUFAB1O14561 156 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 PHBP35232 272 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 LIN9Q5TKA1 542 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 JRKLQ9Y4A0 524 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 EYA2O00167 538 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 SLFN12Q8IYM2 578 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 C3orf20Q8ND61 904 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 SMARCC2Q8TAQ2 1214 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 SECISBP2LQ93073 1101 aaKnown RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 MYCBPQ99417 103 aaPredicted RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 MOV10L1Q9BXT6 1211 aaKnown RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 DNAJC25Q9H1X3 360 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 ARPP21Q9UBL0 812 aaPredicted RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 STK10O94804 968 aaKnown RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 TSPY3P0CV98 308 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 TSPY8P0CW00 308 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 ATP2B1P20020 1258 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 RPGRQ92834 1020 aaKnown RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 FBXW7Q969H0 707 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 FAM96AQ9H5X1 160 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 EMILIN1Q9Y6C2 1016 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 TMEM2Q9UHN6 1383 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 SLC27A2O14975 620 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 RANBP6O60518 1105 aaKnown RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 PSMD2Q13200 908 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 CCDC6Q16204 474 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 TSGA10IPQ3SY00 556 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 TTC6Q86TZ1 520 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 SYCP3Q8IZU3 236 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 VIPAS39Q9H9C1 493 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 CHPF2Q9P2E5 772 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 TMEM132AQ24JP5 1023 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 TARSL2A2RTX5 802 aaKnown RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 ADCY9O60503 1353 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 NCBP1Q09161 790 aaKnown RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 NRKQ7Z2Y5 1582 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 RNF26Q9BY78 433 aaPredicted RBP9.8□□□□□ -0.84
COL6A5-202ENST00000312481 FER1L4A9Z1Z3 1794 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 SPATA31D1Q6ZQQ2 1576 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 KIF11P52732 1056 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 FANCCQ00597 558 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 BIRC3Q13489 604 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 HAUS7Q99871 368 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 DENND2CQ68D51 928 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 PROM2Q8N271 834 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 IFT122Q9HBG6 1241 aa9.8□□□□□ -0.84
COL6A5-202ENST00000312481 PHLDB3Q6NSJ2 640 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 VWDEQ8N2E2 1590 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 USP6P35125 1406 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 LMNAP02545 664 aaKnown RBP9.79□□□□□ -0.84
COL6A5-202ENST00000312481 ASIC1P78348 528 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 CRACR2BQ8N4Y2 399 aaPredicted RBP9.79□□□□□ -0.84
COL6A5-202ENST00000312481 RAPGEF3O95398 923 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 MTX1Q13505 466 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
COL6A5-202ENST00000312481 SH3GLB2Q9NR46 395 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 CETN3O15182 167 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 NBPF10Q6P3W6 841 aaKnown RBP9.79□□□□□ -0.84
COL6A5-202ENST00000312481 NMIQ13287 307 aaPredicted RBP9.79□□□□□ -0.84
COL6A5-202ENST00000312481 INTS8Q75QN2 995 aaKnown RBP9.79□□□□□ -0.84
COL6A5-202ENST00000312481 PPP1R14CQ8TAE6 165 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 TSC1Q92574 1164 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 PDLIM2Q96JY6 352 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 IDEP14735 1019 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 UBE3CQ15386 1083 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 CCDC82Q8N4S0 544 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 EDEM3Q9BZQ6 932 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 SEPT11Q9NVA2 429 aaKnown RBP9.79□□□□□ -0.84
COL6A5-202ENST00000312481 KRT26Q7Z3Y9 468 aa9.79□□□□□ -0.84
COL6A5-202ENST00000312481 VCX3AQ9NNX9 186 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 NCOA3Q9Y6Q9 1424 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 BPIFB4P59827 614 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 PPP1R21Q6ZMI0 780 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 CARD14Q9BXL6 1004 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 ABCF2Q9UG63 623 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 MAGEB6P1A0A0J9YX57 407 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 PTGS1P23219 599 aa9.78□□□□□ -0.84
COL6A5-202ENST00000312481 EPHB4P54760 987 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms