RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ATP2B2Q01814 1243 aa23.55■■□□□ 1.36
VEGFB-201ENST00000309422 SEPT2Q15019 361 aa23.55■■□□□ 1.36
VEGFB-201ENST00000309422 SH3D19Q5HYK7 790 aa23.55■■□□□ 1.36
VEGFB-201ENST00000309422 ZNF589Q86UQ0 364 aaPredicted RBP23.55■■□□□ 1.36
VEGFB-201ENST00000309422 ZNF296Q8WUU4 475 aaPredicted RBP23.55■■□□□ 1.36
VEGFB-201ENST00000309422 TOMM22Q9NS69 142 aa23.55■■□□□ 1.36
VEGFB-201ENST00000309422 TLR2O60603 784 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 TSPY3P0CV98 308 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 TSPY8P0CW00 308 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 EVX2Q03828 476 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 ALX1Q15699 326 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 ZYXQ15942 572 aaKnown RBP23.54■■□□□ 1.36
VEGFB-201ENST00000309422 VPS53Q5VIR6 699 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 TNS4Q8IZW8 715 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 KANSL2Q9H9L4 492 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 CTNNA3Q9UI47 895 aa23.54■■□□□ 1.36
VEGFB-201ENST00000309422 BAZ2AQ9UIF9 1905 aaKnown RBP23.53■■□□□ 1.36
VEGFB-201ENST00000309422 SP3Q02447 781 aa23.53■■□□□ 1.36
VEGFB-201ENST00000309422 SHROOM1Q2M3G4 852 aaPredicted RBP23.53■■□□□ 1.36
VEGFB-201ENST00000309422 KIAA1683Q9H0B3 1180 aa23.53■■□□□ 1.36
VEGFB-201ENST00000309422 RNF41Q9H4P4 317 aaPredicted RBP23.53■■□□□ 1.36
VEGFB-201ENST00000309422 BMP2KLQ5H9B9 411 aa23.52■■□□□ 1.36
VEGFB-201ENST00000309422 COL13A1Q5TAT6 717 aaPredicted RBP23.52■■□□□ 1.36
VEGFB-201ENST00000309422 JAG1P78504 1218 aa23.52■■□□□ 1.36
VEGFB-201ENST00000309422 IMMTQ16891 758 aaKnown RBP23.52■■□□□ 1.36
VEGFB-201ENST00000309422 GPAT2Q6NUI2 795 aa23.52■■□□□ 1.36
VEGFB-201ENST00000309422 CTU1Q7Z7A3 348 aaKnown RBP23.52■■□□□ 1.36
VEGFB-201ENST00000309422 GTF3C2Q8WUA4 911 aaPredicted RBP23.52■■□□□ 1.36
VEGFB-201ENST00000309422 DSCC1Q9BVC3 393 aa23.52■■□□□ 1.36
VEGFB-201ENST00000309422 GOPCQ9HD26 462 aa23.52■■□□□ 1.36
VEGFB-201ENST00000309422 TSPY2A6NKD2 308 aa23.51■■□□□ 1.35
VEGFB-201ENST00000309422 ZNF213O14771 459 aa23.51■■□□□ 1.35
VEGFB-201ENST00000309422 PRDM1O75626 825 aa23.51■■□□□ 1.35
VEGFB-201ENST00000309422 FGAP02671 866 aa23.51■■□□□ 1.35
VEGFB-201ENST00000309422 PCP11498 1178 aaKnown RBP23.51■■□□□ 1.35
VEGFB-201ENST00000309422 MOGSQ13724 837 aa23.51■■□□□ 1.35
VEGFB-201ENST00000309422 TREML2Q5T2D2 321 aa23.51■■□□□ 1.35
VEGFB-201ENST00000309422 KIAA1211Q6ZU35 1233 aa23.51■■□□□ 1.35
VEGFB-201ENST00000309422 RAD21O60216 631 aa23.5■■□□□ 1.35
VEGFB-201ENST00000309422 CYP2C8P10632 490 aa23.5■■□□□ 1.35
VEGFB-201ENST00000309422 RASA1P20936 1047 aa23.5■■□□□ 1.35
VEGFB-201ENST00000309422 CHMLP26374 656 aa23.5■■□□□ 1.35
VEGFB-201ENST00000309422 LPAR1Q92633 364 aa23.5■■□□□ 1.35
VEGFB-201ENST00000309422 C12orf42Q96LP6 360 aa23.5■■□□□ 1.35
VEGFB-201ENST00000309422 ANAPC4Q9UJX5 808 aa23.5■■□□□ 1.35
VEGFB-201ENST00000309422 GCLCP48506 637 aaPredicted RBP23.49■■□□□ 1.35
VEGFB-201ENST00000309422 NT5C2P49902 561 aa23.49■■□□□ 1.35
VEGFB-201ENST00000309422 DGKZQ13574 1117 aa23.49■■□□□ 1.35
VEGFB-201ENST00000309422 CPA4Q9UI42 421 aa23.49■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L15C9J2P7 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L13C9JLJ4 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L11C9JVI0 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L18D6R9N7 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L22D6RA61 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L17D6RBQ6 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L19D6RCP7 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L20D6RJB6 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 RANBP6O60518 1105 aaKnown RBP23.48■■□□□ 1.35
VEGFB-201ENST00000309422 GUCY1A2P33402 732 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 CTDSPL2Q05D32 466 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 USP17L24Q0WX57 530 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 PKN2Q16513 984 aaKnown RBP23.48■■□□□ 1.35
VEGFB-201ENST00000309422 RRP12Q5JTH9 1297 aaKnown RBP23.48■■□□□ 1.35
VEGFB-201ENST00000309422 MFSD6Q6ZSS7 791 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 ACER1Q8TDN7 264 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 R3HDMLQ9H3Y0 253 aa23.48■■□□□ 1.35
VEGFB-201ENST00000309422 MYH8P13535 1937 aa23.47■■□□□ 1.35
VEGFB-201ENST00000309422 SMIM22K7EJ46 135 aa23.47■■□□□ 1.35
VEGFB-201ENST00000309422 VCAM1P19320 739 aa23.47■■□□□ 1.35
VEGFB-201ENST00000309422 HAND2P61296 217 aa23.47■■□□□ 1.35
VEGFB-201ENST00000309422 TANGO6Q9C0B7 1094 aa23.47■■□□□ 1.35
VEGFB-201ENST00000309422 LOC285556D6RIA3 1793 aa23.47■■□□□ 1.35
VEGFB-201ENST00000309422 PHIPQ8WWQ0 1821 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 FOXP2O15409 715 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 EEF2P13639 858 aaKnown RBP23.46■■□□□ 1.35
VEGFB-201ENST00000309422 HOXA7P31268 230 aaPredicted RBP23.46■■□□□ 1.35
VEGFB-201ENST00000309422 TFAP4Q01664 338 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 CCAR1Q8IX12 1150 aaKnown RBP23.46■■□□□ 1.35
VEGFB-201ENST00000309422 CD99L2Q8TCZ2 262 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 ASCC2Q9H1I8 757 aaPredicted RBP23.46■■□□□ 1.35
VEGFB-201ENST00000309422 VCPKMTQ9H867 229 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 EFCC1Q9HA90 598 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 EMILIN3Q9NT22 766 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 TMX2Q9Y320 296 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 TRIM17Q9Y577 477 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 PLIN4Q96Q06 1357 aa23.46■■□□□ 1.35
VEGFB-201ENST00000309422 TTLL1O95922 423 aa23.45■■□□□ 1.34
VEGFB-201ENST00000309422 C17orf99Q6UX52 265 aa23.45■■□□□ 1.34
VEGFB-201ENST00000309422 RPAP3Q9H6T3 665 aaPredicted RBP23.45■■□□□ 1.34
VEGFB-201ENST00000309422 CWC22Q9HCG8 908 aaKnown RBP23.45■■□□□ 1.34
VEGFB-201ENST00000309422 WDR46O15213 610 aaKnown RBP23.44■■□□□ 1.34
VEGFB-201ENST00000309422 ORC4O43929 436 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 CDC45O75419 566 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 GNRH1P01148 92 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 FCGRTP55899 365 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 FAM47AQ5JRC9 791 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 AKNAD1Q5T1N1 836 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 CLEC10AQ8IUN9 316 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 NEDD1Q8NHV4 660 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 ESR2Q92731 530 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms