RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 MOSPD3O75425 235 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 SGPL1O95470 568 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 HCKP08631 526 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 GNL1P36915 607 aaPredicted RBP1.52□□□□□ -2.17
CEP290-201ENST00000309041 BNC1Q01954 994 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 NCAPHQ15003 741 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 SNX17Q15036 470 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 PTPN14Q15678 1187 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 SOWAHCQ53LP3 525 aaPredicted RBP1.52□□□□□ -2.17
CEP290-201ENST00000309041 FAM196AQ6ZSG2 479 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 ANKRD13DQ6ZTN6 518 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 PACS2Q86VP3 889 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 SEPT1Q8WYJ6 367 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 METTL8Q9H825 291 aaKnown RBP1.52□□□□□ -2.17
CEP290-201ENST00000309041 USP40Q9NVE5 1235 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 USP15Q9Y4E8 981 aaPredicted RBP1.52□□□□□ -2.17
CEP290-201ENST00000309041 IPPQ9Y573 584 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 FANCIQ9NVI1 1328 aa1.52□□□□□ -2.17
CEP290-201ENST00000309041 PI4K2BG5E9Z4 385 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ERC2O15083 957 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 CAVIN2O95810 425 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ANXA1P04083 346 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 FXR1P51114 621 aaKnown RBP eCLIP1.51□□□□□ -2.17
CEP290-201ENST00000309041 CACNA2D1P54289 1103 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 NUCB1Q02818 461 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 THEMIS2Q5TEJ8 643 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 INTS5Q6P9B9 1019 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 BHLHA15Q7RTS1 189 aaPredicted RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 SRGAP1Q7Z6B7 1085 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PARP9Q8IXQ6 854 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 NKAIN3Q8N8D7 197 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 GIPC3Q8TF64 312 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 OTUB1Q96FW1 271 aaPredicted RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 MOGAT1Q96PD6 335 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 TESK2Q96S53 571 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 SYBUQ9NX95 663 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 USP36Q9P275 1121 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 MAFFQ9ULX9 164 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ERVK-7P63135 1459 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 TNIKQ9UKE5 1360 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 NUTM2FA1L443 756 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 CAPN9O14815 690 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 HSD3B1P14060 373 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 DDX5P17844 614 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 MARSP56192 900 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 OCLNQ16625 522 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 TTC22Q5TAA0 569 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 SH3PXD2AQ5TCZ1 1133 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 C22orf34Q6ZV56 151 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ZNF554Q86TJ5 538 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PRPF38AQ8NAV1 312 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 ATP11CQ8NB49 1132 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 TRIM58Q8NG06 486 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 BICD2Q8TD16 824 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 CPLX3Q8WVH0 158 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PPM1EQ8WY54 764 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 RMDN1Q96DB5 314 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ERLEC1Q96DZ1 483 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 MTRQ99707 1265 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 DDX23Q9BUQ8 820 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 UTP14AQ9BVJ6 771 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 CEP41Q9BYV8 373 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 OSGEPQ9NPF4 335 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PRDM6Q9NQX0 595 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 GABBR1Q9UBS5 961 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 SEC63Q9UGP8 760 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 CTNND2Q9UQB3 1225 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 CAMTA1Q9Y6Y1 1673 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PLB1Q6P1J6 1458 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 CARNS1A5YM72 827 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ADCY3O60266 1144 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PPM1BO75688 479 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 EIF3GO75821 320 aaKnown RBP eCLIP1.51□□□□□ -2.17
CEP290-201ENST00000309041 CCDC159P0C7I6 412 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 EEF1DP29692 281 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 SYDE2Q5VT97 1194 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ZFAND6Q6FIF0 208 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 TAF8Q7Z7C8 310 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PASD1Q8IV76 773 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 DHX40Q8IX18 779 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 FAM177A1Q8N128 213 aaPredicted RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 CNBD1Q8NA66 436 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 MRRFQ96E11 262 aaKnown RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 JPH4Q96JJ6 628 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 NPAS1Q99742 590 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PPP1R12CQ9BZL4 782 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 TMEM39BQ9GZU3 492 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 SMC3Q9UQE7 1217 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ABCC2Q92887 1545 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ADAMTS12P58397 1594 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 GOLGA6L10A0A0M3HER8 536 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 TAF4O00268 1085 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 SMARCA5O60264 1052 aaPredicted RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 ZEB2O60315 1214 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 EGFRP00533 1210 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 MEF2AQ02078 507 aaPredicted RBP1.51□□□□□ -2.17
CEP290-201ENST00000309041 PTK2Q05397 1052 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 PERM1Q5SV97 790 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 BEND4Q6ZU67 534 aa1.51□□□□□ -2.17
CEP290-201ENST00000309041 ANO5Q75V66 913 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms