RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TNPO2O14787 897 aaKnown RBP31.71■■■□□ 2.67
CDKN2A-201ENST00000304494 GUCY1A2P33402 732 aa31.71■■■□□ 2.67
CDKN2A-201ENST00000304494 ZYXQ15942 572 aaKnown RBP31.71■■■□□ 2.67
CDKN2A-201ENST00000304494 STAP2Q9UGK3 403 aa31.71■■■□□ 2.67
CDKN2A-201ENST00000304494 BAZ2AQ9UIF9 1905 aaKnown RBP31.71■■■□□ 2.67
CDKN2A-201ENST00000304494 CYP2D7A0A087X1C5 515 aa31.7■■■□□ 2.67
CDKN2A-201ENST00000304494 GPAA1O43292 621 aa31.7■■■□□ 2.67
CDKN2A-201ENST00000304494 PRKCZQ05513 592 aa31.7■■■□□ 2.67
CDKN2A-201ENST00000304494 C16orf86Q6ZW13 317 aa31.7■■■□□ 2.67
CDKN2A-201ENST00000304494 GTF3C2Q8WUA4 911 aaPredicted RBP31.7■■■□□ 2.67
CDKN2A-201ENST00000304494 CCDC17Q96LX7 622 aa31.7■■■□□ 2.67
CDKN2A-201ENST00000304494 GSG1L2A8MUP6 293 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 CDK8P49336 464 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 HERVK_113P62684 666 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 SMC5Q8IY18 1101 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 ACER1Q8TDN7 264 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 SH3TC2Q8TF17 1288 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 P2RX7Q99572 595 aaKnown RBP31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 TMEM106CQ9BVX2 250 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 MORF4L1Q9UBU8 362 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 MGAMO43451 1857 aa31.69■■■□□ 2.66
CDKN2A-201ENST00000304494 PDE1AP54750 535 aa31.68■■■□□ 2.66
CDKN2A-201ENST00000304494 SBK1Q52WX2 424 aa31.68■■■□□ 2.66
CDKN2A-201ENST00000304494 COA7Q96BR5 231 aa31.68■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L15C9J2P7 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L13C9JLJ4 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L11C9JVI0 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L18D6R9N7 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L22D6RA61 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L17D6RBQ6 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L19D6RCP7 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L20D6RJB6 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 GRK4P32298 578 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 USP17L24Q0WX57 530 aa31.67■■■□□ 2.66
CDKN2A-201ENST00000304494 M0R2C6 588 aa31.66■■■□□ 2.66
CDKN2A-201ENST00000304494 EVI5LQ96CN4 794 aa31.66■■■□□ 2.66
CDKN2A-201ENST00000304494 LNPKQ9C0E8 428 aa31.66■■■□□ 2.66
CDKN2A-201ENST00000304494 GABRQQ9UN88 632 aa31.66■■■□□ 2.66
CDKN2A-201ENST00000304494 AKR1B1P15121 316 aa31.65■■■□□ 2.66
CDKN2A-201ENST00000304494 VCAM1P19320 739 aa31.65■■■□□ 2.66
CDKN2A-201ENST00000304494 SLAIN1Q8ND83 568 aa31.65■■■□□ 2.66
CDKN2A-201ENST00000304494 RBBP6Q7Z6E9 1792 aaKnown RBP31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 POTEFA5A3E0 1075 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 APPP05067 770 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 TDO2P48775 406 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 FLT3LGP49771 235 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 ZMYM1Q5SVZ6 1142 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 GPRC5AQ8NFJ5 357 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 NACAP1Q9BZK3 213 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 SH2D4AQ9H788 454 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 ARHGEF10LQ9HCE6 1279 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 MYH8P13535 1937 aa31.64■■■□□ 2.66
CDKN2A-201ENST00000304494 PATL2C9JE40 543 aaKnown RBP31.63■■■□□ 2.65
CDKN2A-201ENST00000304494 SMIM22K7EJ46 135 aa31.63■■■□□ 2.65
CDKN2A-201ENST00000304494 IGHDP01880 384 aa31.63■■■□□ 2.65
CDKN2A-201ENST00000304494 IRF5Q13568 498 aa31.63■■■□□ 2.65
CDKN2A-201ENST00000304494 B4GALNT3Q6L9W6 998 aa31.63■■■□□ 2.65
CDKN2A-201ENST00000304494 CATSPERGQ6ZRH7 1159 aa31.63■■■□□ 2.65
CDKN2A-201ENST00000304494 A0A1W2PRG0 241 aa31.62■■■□□ 2.65
CDKN2A-201ENST00000304494 ICA1Q05084 483 aa31.62■■■□□ 2.65
CDKN2A-201ENST00000304494 SEC62Q99442 399 aaKnown RBP31.62■■■□□ 2.65
CDKN2A-201ENST00000304494 ROBO3Q96MS0 1386 aa31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 MINDY4BA8MYZ0 360 aa31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 CHD1LQ86WJ1 897 aa31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 RPAP3Q9H6T3 665 aaPredicted RBP31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 EPB41L4AQ9HCS5 686 aaPredicted RBP31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 TXNRD2Q9NNW7 524 aa31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 RBPJLQ9UBG7 517 aa31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 BIN2Q9UBW5 565 aaPredicted RBP31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 BRCA2P51587 3418 aa31.61■■■□□ 2.65
CDKN2A-201ENST00000304494 ADCY3O60266 1144 aa31.6■■■□□ 2.65
CDKN2A-201ENST00000304494 UBXN2AP68543 259 aa31.6■■■□□ 2.65
CDKN2A-201ENST00000304494 TICAM2Q86XR7 235 aa31.6■■■□□ 2.65
CDKN2A-201ENST00000304494 IFNL3Q8IZI9 196 aa31.6■■■□□ 2.65
CDKN2A-201ENST00000304494 PXYLP1Q8TE99 480 aa31.6■■■□□ 2.65
CDKN2A-201ENST00000304494 MKNK2Q9HBH9 465 aa31.6■■■□□ 2.65
CDKN2A-201ENST00000304494 ZNF287Q9HBT7 754 aa31.6■■■□□ 2.65
CDKN2A-201ENST00000304494 MYCP01106 439 aaPredicted RBP31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 ERVK-9P63128 1117 aa31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 ERVK-24P63145 666 aa31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 NUCB1Q02818 461 aa31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 LPAR1Q92633 364 aa31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 PAGR1Q9BTK6 254 aa31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 KANSL2Q9H9L4 492 aa31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 TMX2Q9Y320 296 aa31.59■■■□□ 2.65
CDKN2A-201ENST00000304494 TNRC18O15417 2968 aaPredicted RBP31.58■■■□□ 2.65
CDKN2A-201ENST00000304494 RABGAP1Q9Y3P9 1069 aa31.58■■■□□ 2.65
CDKN2A-201ENST00000304494 MAPK4P31152 587 aa31.57■■■□□ 2.64
CDKN2A-201ENST00000304494 LBX2Q6XYB7 198 aa31.57■■■□□ 2.64
CDKN2A-201ENST00000304494 SIAH1Q8IUQ4 282 aa31.57■■■□□ 2.64
CDKN2A-201ENST00000304494 CCAR1Q8IX12 1150 aaKnown RBP31.57■■■□□ 2.64
CDKN2A-201ENST00000304494 EN2P19622 333 aaPredicted RBP31.56■■■□□ 2.64
CDKN2A-201ENST00000304494 CLEC10AQ8IUN9 316 aa31.56■■■□□ 2.64
CDKN2A-201ENST00000304494 NAPBQ9H115 298 aa31.56■■■□□ 2.64
CDKN2A-201ENST00000304494 RASA1P20936 1047 aa31.55■■■□□ 2.64
CDKN2A-201ENST00000304494 CCNA1P78396 465 aa31.55■■■□□ 2.64
CDKN2A-201ENST00000304494 STK11IPQ8N1F8 1099 aa31.55■■■□□ 2.64
CDKN2A-201ENST00000304494 TANGO6Q9C0B7 1094 aa31.55■■■□□ 2.64
CDKN2A-201ENST00000304494 VCPKMTQ9H867 229 aa31.55■■■□□ 2.64
CDKN2A-201ENST00000304494 PEX10O60683 326 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms