RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 GCNT3O95395 438 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 ZNF654Q8IZM8 581 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 CCDC24Q8N4L8 307 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 MYCLP12524 364 aaPredicted RBP15.49■□□□□ 0.07
PRKCB-201ENST00000303531 TYW1BQ6NUM6 668 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 PPP1R21Q6ZMI0 780 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 USP28Q96RU2 1077 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 FAM204AQ9H8W3 233 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 KDRP35968 1356 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 E7EVH7 732 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 PKP1Q13835 747 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 CCDC84Q86UT8 332 aaPredicted RBP15.49■□□□□ 0.07
PRKCB-201ENST00000303531 TRPC3Q13507 836 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 KIFC2Q96AC6 838 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 EAF2Q96CJ1 260 aaPredicted RBP15.48■□□□□ 0.07
PRKCB-201ENST00000303531 MRPL44Q9H9J2 332 aaKnown RBP15.48■□□□□ 0.07
PRKCB-201ENST00000303531 KDM5AP29375 1690 aaKnown RBP15.48■□□□□ 0.07
PRKCB-201ENST00000303531 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 FLOT1O75955 427 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 CFAP221Q4G0U5 840 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 REXO1Q8N1G1 1221 aaKnown RBP15.48■□□□□ 0.07
PRKCB-201ENST00000303531 CMTR1Q8N1G2 835 aaKnown RBP15.48■□□□□ 0.07
PRKCB-201ENST00000303531 EXOC3O60645 756 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 PPARDQ03181 441 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 RRAGAQ7L523 313 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 IFIH1Q9BYX4 1025 aaKnown RBP15.48■□□□□ 0.07
PRKCB-201ENST00000303531 ASIC3Q9UHC3 531 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 KCNQ3O43525 872 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 PAK2Q13177 524 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 ZSWIM6Q9HCJ5 1215 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 OAS2P29728 719 aaKnown RBP15.48■□□□□ 0.07
PRKCB-201ENST00000303531 GRM1Q13255 1194 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 RASA3Q14644 834 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 CLUL1Q15846 466 aa15.48■□□□□ 0.07
PRKCB-201ENST00000303531 RPS6KA1Q15418 735 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 GBP6Q6ZN66 633 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 NOSTRINQ8IVI9 506 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 RUFY4Q6ZNE9 571 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 STMN2Q93045 179 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 DDX23Q9BUQ8 820 aaKnown RBP15.47■□□□□ 0.07
PRKCB-201ENST00000303531 FYB2Q5VWT5 728 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 SND1Q7KZF4 910 aaKnown RBP eCLIP15.47■□□□□ 0.073e-8■□□□□ 9.2
PRKCB-201ENST00000303531 RSRC1Q96IZ7 334 aaKnown RBP15.47■□□□□ 0.07
PRKCB-201ENST00000303531 PFKFB2O60825 505 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 GIGYF1O75420 1035 aaPredicted RBP15.47■□□□□ 0.07
PRKCB-201ENST00000303531 NLRC4Q9NPP4 1024 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 GABPB1Q06547 395 aaPredicted RBP15.47■□□□□ 0.07
PRKCB-201ENST00000303531 PICK1Q9NRD5 415 aa15.47■□□□□ 0.07
PRKCB-201ENST00000303531 BIN2Q9UBW5 565 aaPredicted RBP15.47■□□□□ 0.07
PRKCB-201ENST00000303531 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.07
PRKCB-201ENST00000303531 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 PEX26Q7Z412 305 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 SYCE1Q8N0S2 351 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 PPFIBP2Q8ND30 876 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 CTSWP56202 376 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 NBPF14Q5TI25 921 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 C2CD5Q86YS7 1000 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 INPP5BP32019 993 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 GPT2Q8TD30 523 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 A6NNZ2 444 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 HSPD1P10809 573 aaKnown RBP15.46■□□□□ 0.07
PRKCB-201ENST00000303531 TCP10Q12799 353 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 TUBB8Q3ZCM7 444 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 IL17REQ8NFR9 667 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 ARPP21Q9UBL0 812 aaPredicted RBP15.46■□□□□ 0.07
PRKCB-201ENST00000303531 USTQ9Y2C2 406 aa15.46■□□□□ 0.07
PRKCB-201ENST00000303531 SMCO2A6NFE2 343 aa15.46■□□□□ 0.06
PRKCB-201ENST00000303531 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.06
PRKCB-201ENST00000303531 KCNJ18B7U540 433 aa15.46■□□□□ 0.06
PRKCB-201ENST00000303531 BCRP11274 1271 aa15.46■□□□□ 0.06
PRKCB-201ENST00000303531 KCNJ12Q14500 433 aa15.46■□□□□ 0.06
PRKCB-201ENST00000303531 CCDC51Q96ER9 411 aa15.46■□□□□ 0.06
PRKCB-201ENST00000303531 CIB2O75838 187 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 CFBP00751 764 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 POLD1P28340 1107 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 ATP11AP98196 1134 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 SMC1BQ8NDV3 1235 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 DKC1O60832 514 aaKnown RBP eCLIP15.45■□□□□ 0.06
PRKCB-201ENST00000303531 DESI2Q9BSY9 194 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 TMOD4Q9NZQ9 345 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 ZMYM6O95789 1325 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 GAS8O95995 478 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 IFNL3Q8IZI9 196 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 ZSCAN10Q96SZ4 725 aaPredicted RBP15.45■□□□□ 0.06
PRKCB-201ENST00000303531 SLC8A3P57103 927 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 GDAP1L1Q96MZ0 367 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 HAUS7Q99871 368 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 NUCKS1Q9H1E3 243 aaKnown RBP15.45■□□□□ 0.06
PRKCB-201ENST00000303531 SAR1BQ9Y6B6 198 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 RGS12O14924 1447 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 USP17L12C9JPN9 530 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 USP17L21D6R901 530 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 ADD1P35611 737 aaKnown RBP15.45■□□□□ 0.06
PRKCB-201ENST00000303531 TAOK1Q7L7X3 1001 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 CCDC105Q8IYK2 499 aa15.45■□□□□ 0.06
PRKCB-201ENST00000303531 ODF2LQ9ULJ1 636 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms