RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 A0A1W2PQD8 194 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
SDC2-201ENST00000302190 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
SDC2-201ENST00000302190 RFX5P48382 616 aaPredicted RBP15.9■□□□□ 0.14
SDC2-201ENST00000302190 CCDC148Q8NFR7 591 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 GOLGA1Q92805 767 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 CSRNP2Q9H175 543 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 ZCCHC17Q9NP64 241 aaKnown RBP15.9■□□□□ 0.14
SDC2-201ENST00000302190 ZMYM6O95789 1325 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 BCL9O00512 1426 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 MACROD2A1Z1Q3 448 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
SDC2-201ENST00000302190 TMTC2Q8N394 836 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 LCORLQ8N3X6 602 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 IRX2Q9BZI1 471 aaPredicted RBP15.9■□□□□ 0.14
SDC2-201ENST00000302190 SHANK3Q9BYB0 1731 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 TNKSO95271 1327 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 KRT9P35527 623 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 FANCBQ8NB91 859 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 RASGRP4Q8TDF6 673 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 CWC15Q9P013 229 aaKnown RBP15.89■□□□□ 0.13
SDC2-201ENST00000302190 SAP30BPQ9UHR5 308 aaKnown RBP15.89■□□□□ 0.13
SDC2-201ENST00000302190 THRAP3Q9Y2W1 955 aaKnown RBP15.89■□□□□ 0.13
SDC2-201ENST00000302190 TCHHQ07283 1943 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 PALLDQ8WX93 1383 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 PKD1L3Q7Z443 1732 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 CTAGE15A4D2H0 777 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 CTAGE9A4FU28 777 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 CTAGE8P0CG41 777 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 ARMCX5Q6P1M9 558 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 CACNA2D4Q7Z3S7 1137 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 CTAGE6Q86UF2 777 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 CTAGE4Q8IX94 777 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.89■□□□□ 0.13
SDC2-201ENST00000302190 TMX4Q9H1E5 349 aaPredicted RBP15.89■□□□□ 0.13
SDC2-201ENST00000302190 BAZ2BQ9UIF8 2168 aaKnown RBP15.89■□□□□ 0.13
SDC2-201ENST00000302190 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 ADD2P35612 726 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 RBM6P78332 1123 aaKnown RBP15.89■□□□□ 0.13
SDC2-201ENST00000302190 SPA17Q15506 151 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 BARGINQ6ZT62 677 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 UBA5Q9GZZ9 404 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
SDC2-201ENST00000302190 GOLGA6L9A6NEM1 432 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 ASIC1P78348 528 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 EXOSC10Q01780 885 aaKnown RBP15.88■□□□□ 0.13
SDC2-201ENST00000302190 PCCAP05165 728 aaPredicted RBP15.88■□□□□ 0.13
SDC2-201ENST00000302190 CAPN2P17655 700 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 EIF6P56537 245 aaKnown RBP15.88■□□□□ 0.13
SDC2-201ENST00000302190 DYNLL1P63167 89 aaKnown RBP15.88■□□□□ 0.13
SDC2-201ENST00000302190 TTLL11Q8NHH1 800 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 OXER1Q8TDS5 423 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 MMRN2Q9H8L6 949 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 PDE4BQ07343 736 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 TERF2Q15554 542 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
SDC2-201ENST00000302190 ZSCAN29Q8IWY8 852 aaPredicted RBP15.88■□□□□ 0.13
SDC2-201ENST00000302190 IQUBQ8NA54 791 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 TCP11L1Q9NUJ3 509 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 ZNF652Q9Y2D9 606 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 NEDD4P46934 1319 aa15.88■□□□□ 0.13
SDC2-201ENST00000302190 COL22A1Q8NFW1 1626 aaPredicted RBP15.88■□□□□ 0.13
SDC2-201ENST00000302190 AKR1B10O60218 316 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 SLFN14P0C7P3 912 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 CHMP4BP1P59074 171 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 RASGRF1Q13972 1273 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 CCDC96Q2M329 555 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 USPL1Q5W0Q7 1092 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 USP49Q70CQ1 688 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 GPKOWQ92917 476 aaPredicted RBP eCLIP15.87■□□□□ 0.135e-11■■■■■ 63.1
SDC2-201ENST00000302190 SOWAHDA6NJG2 315 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 ZPR1O75312 459 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 TSPY3P0CV98 308 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 TSPY8P0CW00 308 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 OAS2P29728 719 aaKnown RBP15.87■□□□□ 0.13
SDC2-201ENST00000302190 CLCN6P51797 869 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
SDC2-201ENST00000302190 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 TTC38Q5R3I4 469 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 MLKLQ8NB16 471 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
SDC2-201ENST00000302190 H0YHG0 523 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 PPARAQ07869 468 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 SHC4Q6S5L8 630 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 C10orf67Q8IYJ2 551 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 LINC00116Q8NCU8 138 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.87■□□□□ 0.13
SDC2-201ENST00000302190 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
SDC2-201ENST00000302190 RSPH14Q9UHP6 348 aa15.87■□□□□ 0.13
SDC2-201ENST00000302190 E4F1Q66K89 784 aaPredicted RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 CRNKL1Q9BZJ0 848 aaKnown RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 SEC63Q9UGP8 760 aaKnown RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 ITGB4P16144 1822 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 SH2B2O14492 632 aaPredicted RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 ENC1O14682 589 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 CCZ1BP86790 482 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms