RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 hCG_1984214I3L0E3 225 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 CTAGE5O15320 804 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 EIF3DO15371 548 aaKnown RBP eCLIP3.55□□□□□ -1.84
HDX-201ENST00000297977 TPD52L2O43399 206 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 PRDM1O75626 825 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 BMP3P12645 472 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 STXBP4Q6ZWJ1 553 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ZNF713Q8N859 430 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 AMNQ9BXJ7 453 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 TSPYL1Q9H0U9 437 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 OSBPL5Q9H0X9 879 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 PIK3C2AO00443 1686 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 NHSL1Q5SYE7 1610 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 SPDYE2BA6NHP3 402 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L15C9J2P7 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L13C9JLJ4 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L11C9JVI0 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L18D6R9N7 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L22D6RA61 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L17D6RBQ6 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L19D6RCP7 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L20D6RJB6 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 SPDYE6P0CI01 402 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 KRT85P78386 507 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 USP17L24Q0WX57 530 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 ALX1Q15699 326 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 ZYXQ15942 572 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 TPD52L1Q16890 204 aaPredicted RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 TSHZ3Q63HK5 1081 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 POLLQ9UGP5 575 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 MON2Q7Z3U7 1717 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 POTEB2H3BUK9 544 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 TNPO2O14787 897 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 ZEB2O60315 1214 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 VIL1P09327 827 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 MAP2K1Q02750 393 aaPredicted RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 RASSF7Q02833 373 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 SPP2Q13103 211 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 STIM1Q13586 685 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 MAP1SQ66K74 1059 aaPredicted RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 SAMD7Q7Z3H4 446 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 PRPF38AQ8NAV1 312 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 PNMA1Q8ND90 353 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 RRAGCQ9HB90 399 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 CCDC39Q9UFE4 941 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 KCNH4Q9UQ05 1017 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 MRC1P22897 1456 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 MAP2P11137 1827 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 SALL1Q9NSC2 1324 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 IGHDP01880 384 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 CYP2E1P05181 493 aaPredicted RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 MCAMP43121 646 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 CREB3L3Q68CJ9 461 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 OTUD5Q96G74 571 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 SDF4Q9BRK5 362 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 AP5M1Q9H0R1 490 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 PRDM16Q9HAZ2 1276 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 TTC36A6NLP5 189 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 NOP56O00567 594 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 PPM1FP49593 454 aaPredicted RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 RCAN1P53805 252 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 FSTL1Q12841 308 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 SLC4A8Q2Y0W8 1093 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 ILDR2Q71H61 639 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 ATG9AQ7Z3C6 839 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 NBPF11Q86T75 865 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 CKAP2LQ8IYA6 745 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 FAM43AQ8N2R8 423 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 PLCD3Q8N3E9 789 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 NSUN4Q96CB9 384 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 GPR101Q96P66 508 aaPredicted RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 STRBPQ96SI9 672 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 NBPF3Q9H094 633 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 MTIF3Q9H2K0 278 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 TAF1DQ9H5J8 278 aaPredicted RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 USP25Q9UHP3 1055 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 SAMM50Q9Y512 469 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 FAM208AQ9UK61 1670 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 CCL15-CCL14A0A0B4J2E2 113 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 LOC102724159A0A0B4J2E5 919 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 TRIM75PA6NK02 468 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 TMEM88BA6NKF7 163 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 GH2P01242 217 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 HSPD1P10809 573 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 UBA7P41226 1012 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 STK3Q13188 491 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 PWP2Q15269 919 aaKnown RBP3.54□□□□□ -1.84
HDX-201ENST00000297977 CCL15Q16663 113 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 DACT2Q5SW24 774 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 MFSD14CQ5VZR4 134 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 GALNT17Q6IS24 598 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 FBXO11Q86XK2 927 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 PIBF1Q8WXW3 757 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 SLC26A6Q9BXS9 759 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 AZI2Q9H6S1 392 aa3.54□□□□□ -1.84
HDX-201ENST00000297977 KIF20BQ96Q89 1820 aa3.53□□□□□ -1.84
HDX-201ENST00000297977 TMEM232C9JQI7 657 aa3.53□□□□□ -1.84
HDX-201ENST00000297977 HMGB3O15347 200 aaKnown RBP3.53□□□□□ -1.84
HDX-201ENST00000297977 KINO60870 393 aaKnown RBP3.53□□□□□ -1.84
HDX-201ENST00000297977 DDAH1O94760 285 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms