RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 FPGT-TNNI3KV9GXZ4 949 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 COL6A3P12111 3177 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 CCND3P30281 292 aaPredicted RBP12.86□□□□□ -0.35
RFC4-201ENST00000296273 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 MAP2K5Q13163 448 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 MFSD14CQ5VZR4 134 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 TMED8Q6PL24 325 aaPredicted RBP12.86□□□□□ -0.35
RFC4-201ENST00000296273 ADGRA1Q86SQ6 560 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 EDC3Q96F86 508 aaKnown RBP12.86□□□□□ -0.35
RFC4-201ENST00000296273 CHMP4BQ9H444 224 aaKnown RBP12.86□□□□□ -0.35
RFC4-201ENST00000296273 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 FOCADQ5VW36 1801 aa12.86□□□□□ -0.35
RFC4-201ENST00000296273 PEX10O60683 326 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 BCAR3O75815 825 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 OS9Q13438 667 aaPredicted RBP12.85□□□□□ -0.35
RFC4-201ENST00000296273 CCL14Q16627 93 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 LRRC26Q2I0M4 334 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 TATDN1Q6P1N9 297 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 LBX2Q6XYB7 198 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 Q7L0L9 218 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 FEZ1Q99689 392 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 EHD4Q9H223 541 aa12.85□□□□□ -0.35
RFC4-201ENST00000296273 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 GH2P01242 217 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 HOXC6P09630 235 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 POLA2Q14181 598 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 SHROOM1Q2M3G4 852 aaPredicted RBP12.84□□□□□ -0.35
RFC4-201ENST00000296273 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
RFC4-201ENST00000296273 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
RFC4-201ENST00000296273 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
RFC4-201ENST00000296273 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 IVNS1ABPQ9Y6Y0 642 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 CDK5RAP2Q96SN8 1893 aa12.84□□□□□ -0.35
RFC4-201ENST00000296273 CYP7A1P22680 504 aa12.83□□□□□ -0.36
RFC4-201ENST00000296273 PTPREP23469 700 aa12.83□□□□□ -0.36
RFC4-201ENST00000296273 ZAP70P43403 619 aa12.83□□□□□ -0.36
RFC4-201ENST00000296273 USP5P45974 858 aa12.83□□□□□ -0.36
RFC4-201ENST00000296273 MDM2Q00987 491 aaPredicted RBP12.83□□□□□ -0.36
RFC4-201ENST00000296273 TTC6Q86TZ1 520 aa12.83□□□□□ -0.36
RFC4-201ENST00000296273 LPAR1Q92633 364 aa12.83□□□□□ -0.36
RFC4-201ENST00000296273 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
RFC4-201ENST00000296273 CABP5Q9NP86 173 aa12.83□□□□□ -0.36
RFC4-201ENST00000296273 DDX20Q9UHI6 824 aaKnown RBP12.83□□□□□ -0.36
RFC4-201ENST00000296273 DNM1LO00429 736 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
RFC4-201ENST00000296273 CNMDO75829 334 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
RFC4-201ENST00000296273 ATP8B2P98198 1209 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 ATP2B2Q01814 1243 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 GRB14Q14449 540 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
RFC4-201ENST00000296273 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 WDR78Q5VTH9 848 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
RFC4-201ENST00000296273 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
RFC4-201ENST00000296273 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 IDH1O75874 414 aaKnown RBP12.81□□□□□ -0.36
RFC4-201ENST00000296273 VCAM1P19320 739 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 ZYXQ15942 572 aaKnown RBP12.81□□□□□ -0.36
RFC4-201ENST00000296273 ABCB5Q2M3G0 1257 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 CLUAP1Q96AJ1 413 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 PIH1D3Q9NQM4 214 aaKnown RBP12.81□□□□□ -0.36
RFC4-201ENST00000296273 NOP58Q9Y2X3 529 aaKnown RBP12.81□□□□□ -0.36
RFC4-201ENST00000296273 STRNO43815 780 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 CNGA1P29973 690 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
RFC4-201ENST00000296273 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 MIGA1Q8NAN2 632 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 ARRDC4Q8NCT1 418 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 FLRT1Q9NZU1 646 aa12.81□□□□□ -0.36
RFC4-201ENST00000296273 DBNLQ9UJU6 430 aaKnown RBP12.81□□□□□ -0.36
RFC4-201ENST00000296273 FRMPD3Q5JV73 1810 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
RFC4-201ENST00000296273 OLFML2BQ68BL8 750 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 DPP9Q86TI2 863 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 TMEM57Q8N5G2 664 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 MAGEB6Q8N7X4 407 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 RPAP3Q9H6T3 665 aaPredicted RBP12.8□□□□□ -0.36
RFC4-201ENST00000296273 HOXC10Q9NYD6 342 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 TNNQ9UQP3 1299 aa12.8□□□□□ -0.36
RFC4-201ENST00000296273 MYH1P12882 1939 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 CYBAP13498 195 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 COG2Q14746 738 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms