RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 SYKP43405 635 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 EPHB4P54760 987 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 G3BP1Q13283 466 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 DDX20Q9UHI6 824 aaKnown RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 PPP1R37O75864 691 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 SASH3O75995 380 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 DDHD2O94830 711 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 LDHAP00338 332 aaKnown RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 TUFMP49411 452 aaKnown RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 VSNL1P62760 191 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 PHEXP78562 749 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 BZW1Q7L1Q6 419 aaKnown RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 NRDE2Q9H7Z3 1164 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 ATXN10Q9UBB4 475 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 DNAJC6O75061 913 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 CETN2P41208 172 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 PEX5LQ8IYB4 626 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 NAF1Q96HR8 494 aaKnown RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 TTC1Q99614 292 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 NKIRAS1Q9NYS0 192 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 APOEP02649 317 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 LEO1Q8WVC0 666 aaPredicted RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 RIN2Q8WYP3 895 aaPredicted RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 ESYT1Q9BSJ8 1104 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 HIP1O00291 1037 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 RAPGEF3O95398 923 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 AK2P54819 239 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 FLIIQ13045 1269 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 C11orf91Q3C1V1 193 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 REXO1L1PQ8IX06 675 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 SLC35F6Q8N357 371 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 GNAI1P63096 354 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 KRT72Q14CN4 511 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
SNIP1-201ENST00000296215 RUSC2Q8N2Y8 1516 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
SNIP1-201ENST00000296215 FESP07332 822 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 GRIK3Q13003 919 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 SH3GLB1Q9Y371 365 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 RAPGEF2Q9Y4G8 1499 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 NR1I2O75469 434 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 KRT4P19013 534 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 TMTC1Q8IUR5 882 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 ENAHQ8N8S7 591 aaPredicted RBP12.97□□□□□ -0.33
SNIP1-201ENST00000296215 FSD1Q9BTV5 496 aa12.97□□□□□ -0.33
SNIP1-201ENST00000296215 LCA5LO95447 670 aa12.96□□□□□ -0.33
SNIP1-201ENST00000296215 ATP5JP18859 108 aa12.96□□□□□ -0.33
SNIP1-201ENST00000296215 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
SNIP1-201ENST00000296215 LRRC8CQ8TDW0 803 aa12.96□□□□□ -0.33
SNIP1-201ENST00000296215 POLA1P09884 1462 aaPredicted RBP12.96□□□□□ -0.33
SNIP1-201ENST00000296215 GUCY1A3Q02108 690 aa12.96□□□□□ -0.33
SNIP1-201ENST00000296215 LONRF3Q496Y0 759 aa12.96□□□□□ -0.33
SNIP1-201ENST00000296215 Q9H521 79 aa12.96□□□□□ -0.33
SNIP1-201ENST00000296215 KLC3Q6P597 504 aa12.96□□□□□ -0.34
SNIP1-201ENST00000296215 SARM1Q6SZW1 724 aa12.96□□□□□ -0.34
SNIP1-201ENST00000296215 CCT7Q99832 543 aa12.96□□□□□ -0.34
SNIP1-201ENST00000296215 MTA3Q9BTC8 594 aa12.96□□□□□ -0.34
SNIP1-201ENST00000296215 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.34
SNIP1-201ENST00000296215 PEX14O75381 377 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
SNIP1-201ENST00000296215 MSH2P43246 934 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 TDRD12Q587J7 1177 aaKnown RBP12.95□□□□□ -0.34
SNIP1-201ENST00000296215 NUTM2DQ5VT03 806 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-201ENST00000296215 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-201ENST00000296215 DNAJC9Q8WXX5 260 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 CCDC68Q9H2F9 335 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 SEL1LQ9UBV2 794 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 ZBTB21Q9ULJ3 1066 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.95□□□□□ -0.34
SNIP1-201ENST00000296215 ARHGAP10A1A4S6 786 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 MSL3P1P0C860 447 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 LMNB1P20700 586 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 S100A1P23297 94 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 CCDC15Q0P6D6 951 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 FOXD4Q12950 439 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-201ENST00000296215 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 KAT2BQ92831 832 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 NCOA2Q15596 1464 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 CHMP2AO43633 222 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
SNIP1-201ENST00000296215 MTTPP55157 894 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 KRT32Q14532 448 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 NAA35Q5VZE5 725 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 CYP26C1Q6V0L0 522 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 IQCF2Q8IXL9 164 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 SEPT10Q9P0V9 454 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms