RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 KAT14Q9H8E8 782 aa16.09■□□□□ 0.17
NXF1-201ENST00000294172 BTDP43251 543 aa16.08■□□□□ 0.17
NXF1-201ENST00000294172 PNOCQ13519 176 aa16.08■□□□□ 0.17
NXF1-201ENST00000294172 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.17
NXF1-201ENST00000294172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.08■□□□□ 0.17
NXF1-201ENST00000294172 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.17
NXF1-201ENST00000294172 IL1R1P14778 569 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 PLCD1P51178 756 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 NLRP12P59046 1061 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 PPP4CP60510 307 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
NXF1-201ENST00000294172 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.16
NXF1-201ENST00000294172 MFSD14BQ5SR56 506 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 SARM1Q6SZW1 724 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 CNNM3Q8NE01 707 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 RTFDC1Q9BY42 306 aaPredicted RBP16.08■□□□□ 0.16
NXF1-201ENST00000294172 FBXO2Q9UK22 296 aaPredicted RBP16.08■□□□□ 0.16
NXF1-201ENST00000294172 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.16
NXF1-201ENST00000294172 CNTNAP5Q8WYK1 1306 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 FAM237AA0A1B0GTK4 181 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 PTPREP23469 700 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 HOXA10P31260 410 aaPredicted RBP16.07■□□□□ 0.16
NXF1-201ENST00000294172 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 BRMS1Q9HCU9 246 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 IL17RBQ9NRM6 502 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 MTMR7Q9Y216 660 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 MYH6P13533 1939 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 ZNF444Q8N0Y2 327 aaPredicted RBP16.07■□□□□ 0.16
NXF1-201ENST00000294172 CRAMP1Q96RY5 1269 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 FAM13BQ9NYF5 915 aa16.07■□□□□ 0.16
NXF1-201ENST00000294172 LAMB1P07942 1786 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 KIAA1551Q9HCM1 1747 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 IGSF3O75054 1194 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 TEX11Q8IYF3 940 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 PPEF1O14829 653 aaPredicted RBP16.06■□□□□ 0.16
NXF1-201ENST00000294172 KIF5BP33176 963 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 LRMPQ12912 555 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 PNMA1Q8ND90 353 aa16.06■□□□□ 0.16
NXF1-201ENST00000294172 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
NXF1-201ENST00000294172 SCG2P13521 617 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
NXF1-201ENST00000294172 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
NXF1-201ENST00000294172 DGKHQ86XP1 1220 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 KIAA1524Q8TCG1 905 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
NXF1-201ENST00000294172 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
NXF1-201ENST00000294172 CDC25BP30305 580 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 NLRP5P59047 1200 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 CCDC144BQ3MJ40 725 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 PDILTQ8N807 584 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 MRFAP1L1Q96HT8 127 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
NXF1-201ENST00000294172 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
NXF1-201ENST00000294172 FOXN1O15353 648 aa16.04■□□□□ 0.16
NXF1-201ENST00000294172 GTF2IP78347 998 aa16.04■□□□□ 0.16
NXF1-201ENST00000294172 BRWD3Q6RI45 1802 aa16.04■□□□□ 0.16
NXF1-201ENST00000294172 DLEC1Q9Y238 1755 aa16.04■□□□□ 0.16
NXF1-201ENST00000294172 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
NXF1-201ENST00000294172 ZNF174Q15697 407 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 PFKFB3Q16875 520 aaPredicted RBP16.03■□□□□ 0.16
NXF1-201ENST00000294172 OLFM4Q6UX06 510 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 USP49Q70CQ1 688 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 GOLGB1Q14789 3259 aaKnown RBP16.03■□□□□ 0.16
NXF1-201ENST00000294172 NPY5RQ15761 445 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
NXF1-201ENST00000294172 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
NXF1-201ENST00000294172 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
NXF1-201ENST00000294172 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 SERTAD1Q9UHV2 236 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 PCDHA5Q9Y5H7 936 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 ROBO3Q96MS0 1386 aa16.03■□□□□ 0.16
NXF1-201ENST00000294172 F8W031 263 aaPredicted RBP16.02■□□□□ 0.16
NXF1-201ENST00000294172 WNT7AO00755 349 aa16.02■□□□□ 0.16
NXF1-201ENST00000294172 RASA1P20936 1047 aa16.02■□□□□ 0.16
NXF1-201ENST00000294172 TPM4P67936 248 aa16.02■□□□□ 0.16
NXF1-201ENST00000294172 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.16
NXF1-201ENST00000294172 SLF2Q8IX21 1173 aa16.02■□□□□ 0.16
NXF1-201ENST00000294172 SPTLC3Q9NUV7 552 aa16.02■□□□□ 0.16
NXF1-201ENST00000294172 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.16
NXF1-201ENST00000294172 FLT1P17948 1338 aa16.02■□□□□ 0.16
NXF1-201ENST00000294172 SMTNL1A8MU46 457 aa16.02■□□□□ 0.15
NXF1-201ENST00000294172 SMC2O95347 1197 aa16.02■□□□□ 0.15
NXF1-201ENST00000294172 APBA3O96018 575 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms