RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 G3V3G9 751 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 PPP6R2O75170 966 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 WDHD1O75717 1129 aaPredicted RBP11.76□□□□□ -0.53
C9orf43-201ENST00000288462 TSPY3P0CV98 308 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 TSPY8P0CW00 308 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 KIF5BP33176 963 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 AKAP17AQ02040 695 aaKnown RBP11.76□□□□□ -0.53
C9orf43-201ENST00000288462 GRM4Q14833 912 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 UVSSAQ2YD98 709 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 DACT2Q5SW24 774 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 AXDND1Q5T1B0 1012 aaPredicted RBP11.76□□□□□ -0.53
C9orf43-201ENST00000288462 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 STRIP1Q5VSL9 837 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
C9orf43-201ENST00000288462 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
C9orf43-201ENST00000288462 PNMA1Q8ND90 353 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 PHF20Q9BVI0 1012 aa11.76□□□□□ -0.53
C9orf43-201ENST00000288462 PDGFDQ9GZP0 370 aaPredicted RBP11.76□□□□□ -0.53
C9orf43-201ENST00000288462 USP17L3A6NCW0 530 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 USP17L4A6NCW7 530 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
C9orf43-201ENST00000288462 ECE2O60344 883 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 NOVP48745 357 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 GABPAQ06546 454 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 SF3B2Q13435 895 aaKnown RBP11.75□□□□□ -0.53
C9orf43-201ENST00000288462 SF3A1Q15459 793 aaKnown RBP11.75□□□□□ -0.53
C9orf43-201ENST00000288462 CAMK4Q16566 473 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 USP17L1Q7RTZ2 530 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 FMR1NBQ8N0W7 255 aaPredicted RBP11.75□□□□□ -0.53
C9orf43-201ENST00000288462 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 MYO3BQ8WXR4 1341 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 CTAGE5O15320 804 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 XBP1P17861 261 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 TYRO3Q06418 890 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 APOBEC3HQ6NTF7 200 aaKnown RBP11.75□□□□□ -0.53
C9orf43-201ENST00000288462 DEFB132Q7Z7B7 95 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
C9orf43-201ENST00000288462 DDX4Q9NQI0 724 aaKnown RBP11.75□□□□□ -0.53
C9orf43-201ENST00000288462 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
C9orf43-201ENST00000288462 CRKP46108 304 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 TOB1P50616 345 aaPredicted RBP11.74□□□□□ -0.53
C9orf43-201ENST00000288462 SCNN1DP51172 638 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
C9orf43-201ENST00000288462 CDC42EP5Q6NZY7 148 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 JMYQ8N9B5 988 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 SUPT20HQ8NEM7 779 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 OXER1Q8TDS5 423 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 SLC16A10Q8TF71 515 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 ZDHHC15Q96MV8 337 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 KCNQ5Q9NR82 932 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
C9orf43-201ENST00000288462 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 FAM237AA0A1B0GTK4 181 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 KINO60870 393 aaKnown RBP11.74□□□□□ -0.53
C9orf43-201ENST00000288462 CMA1P23946 247 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 NR5A1Q13285 461 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 NPY5RQ15761 445 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 PFKFB3Q16875 520 aaPredicted RBP11.74□□□□□ -0.53
C9orf43-201ENST00000288462 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 RILPL1Q5EBL4 403 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 TMEM47Q9BQJ4 181 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 OSBPL5Q9H0X9 879 aaPredicted RBP11.74□□□□□ -0.53
C9orf43-201ENST00000288462 USP40Q9NVE5 1235 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
C9orf43-201ENST00000288462 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
C9orf43-201ENST00000288462 BRCA1P38398 1863 aaKnown RBP11.73□□□□□ -0.53
C9orf43-201ENST00000288462 SCG2P13521 617 aa11.73□□□□□ -0.53
C9orf43-201ENST00000288462 KRT2P35908 639 aa11.73□□□□□ -0.53
C9orf43-201ENST00000288462 GNAQP50148 359 aa11.73□□□□□ -0.53
C9orf43-201ENST00000288462 PICALMQ13492 652 aa11.73□□□□□ -0.53
C9orf43-201ENST00000288462 AOC3Q16853 763 aa11.73□□□□□ -0.53
C9orf43-201ENST00000288462 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
C9orf43-201ENST00000288462 MAD2L2Q9UI95 211 aa11.73□□□□□ -0.53
C9orf43-201ENST00000288462 A0A1B0GVL5 298 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 hCG_1642624A0A1W2PR95 340 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 NDUFA8P51970 172 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
C9orf43-201ENST00000288462 COL4A5P29400 1685 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 IGKV6D-41A0A0C4DH26 115 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 PALM3A6NDB9 673 aaPredicted RBP11.72□□□□□ -0.53
C9orf43-201ENST00000288462 CUTAO60888 179 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 PFKFB1P16118 471 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 MARCKSP29966 332 aaPredicted RBP11.72□□□□□ -0.53
C9orf43-201ENST00000288462 SLC35G1Q2M3R5 365 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 STAG2Q8N3U4 1231 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 FAM200AQ8TCP9 573 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 CEP95Q96GE4 821 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 EHD4Q9H223 541 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 STX8Q9UNK0 236 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 HPSEQ9Y251 543 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms