RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ZSCAN25Q6NSZ9 544 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 GIMAP6Q6P9H5 292 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 CTR9Q6PD62 1173 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 PRRT2Q7Z6L0 340 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-201ENST00000288344 SIAH1Q8IUQ4 282 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 EVI5LQ96CN4 794 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 GPATCH3Q96I76 525 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 CRNKL1Q9BZJ0 848 aaKnown RBP11.05□□□□□ -0.64
HMGN1-201ENST00000288344 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-201ENST00000288344 ZCCHC17Q9NP64 241 aaKnown RBP11.05□□□□□ -0.64
HMGN1-201ENST00000288344 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 SERPINB13Q9UIV8 391 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 ZHX2Q9Y6X8 837 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 ADGRA2Q96PE1 1338 aa11.05□□□□□ -0.64
HMGN1-201ENST00000288344 ATAD5Q96QE3 1844 aa11.04□□□□□ -0.64
HMGN1-201ENST00000288344 USP17L12C9JPN9 530 aa11.04□□□□□ -0.64
HMGN1-201ENST00000288344 USP17L21D6R901 530 aa11.04□□□□□ -0.64
HMGN1-201ENST00000288344 ALDH1A1P00352 501 aa11.04□□□□□ -0.64
HMGN1-201ENST00000288344 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
HMGN1-201ENST00000288344 TTC6Q86TZ1 520 aa11.04□□□□□ -0.64
HMGN1-201ENST00000288344 CCDC84Q86UT8 332 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-201ENST00000288344 MKI67P46013 3256 aaKnown RBP11.03□□□□□ -0.64
HMGN1-201ENST00000288344 CYP2D7A0A087X1C5 515 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 CCL15-CCL14A0A0B4J2E2 113 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 PATL2C9JE40 543 aaKnown RBP11.03□□□□□ -0.64
HMGN1-201ENST00000288344 GPR25O00155 361 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 TULP1O00294 542 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-201ENST00000288344 GPAA1O43292 621 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 CETPP11597 493 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 USP5P45974 858 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 CRHR2Q13324 411 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 CCL15Q16663 113 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 C17orf99Q6UX52 265 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGN1-201ENST00000288344 TACC3Q9Y6A5 838 aa11.03□□□□□ -0.64
HMGN1-201ENST00000288344 NAV1Q8NEY1 1877 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 ASNSP08243 561 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 GSPT1P15170 499 aaKnown RBP11.02□□□□□ -0.65
HMGN1-201ENST00000288344 MLLT3P42568 568 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-201ENST00000288344 C16orf86Q6ZW13 317 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 SLC44A5Q8NCS7 719 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 ZNF296Q8WUU4 475 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-201ENST00000288344 DYNLL2Q96FJ2 89 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 BEGAINQ9BUH8 593 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 TBC1D2Q9BYX2 928 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 ZBTB21Q9ULJ3 1066 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 SLC45A1Q9Y2W3 748 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 SLC4A4Q9Y6R1 1079 aa11.02□□□□□ -0.65
HMGN1-201ENST00000288344 USP17L5A8MUK1 530 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 TLR2O60603 784 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 FGRP09769 529 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 FOXK1P85037 733 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 SPP2Q13103 211 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 ALX1Q15699 326 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 IFNL3Q8IZI9 196 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 FAM227BQ96M60 508 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 HELLSQ9NRZ9 838 aa11.01□□□□□ -0.65
HMGN1-201ENST00000288344 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-201ENST00000288344 ROBO3Q96MS0 1386 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 A0A0D9SFI3 127 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 A0A1W2PRG0 241 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 GH2P01242 217 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 HLA-DOAP06340 250 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 SDSP20132 328 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 CTGFP29279 349 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 CDK8P49336 464 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 BACE1P56817 501 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 DGKZQ13574 1117 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 SLC4A8Q2Y0W8 1093 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 CERKLQ49MI3 558 aaPredicted RBP11□□□□□ -0.65
HMGN1-201ENST00000288344 VPS53Q5VIR6 699 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 C12orf42Q96LP6 360 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 FSD1Q9BTV5 496 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 IL25Q9H293 177 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 PICK1Q9NRD5 415 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 LOC285556D6RIA3 1793 aa11□□□□□ -0.65
HMGN1-201ENST00000288344 PDHXO00330 501 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 GDF11O95390 407 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-201ENST00000288344 BCRP11274 1271 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 GNAT2P19087 354 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 HOXA7P31268 230 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-201ENST00000288344 TREML2Q5T2D2 321 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 TTC22Q5TAA0 569 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 CCDC129Q6ZRS4 1044 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 FASTKD5Q7L8L6 764 aaKnown RBP10.99□□□□□ -0.65
HMGN1-201ENST00000288344 ZNF589Q86UQ0 364 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-201ENST00000288344 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-201ENST00000288344 ACER1Q8TDN7 264 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 SWAP70Q9UH65 585 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 ANAPC4Q9UJX5 808 aa10.99□□□□□ -0.65
HMGN1-201ENST00000288344 RLFQ13129 1914 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 IGKV6D-41A0A0C4DH26 115 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 TRIM75PA6NK02 468 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms