RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 EDC3Q96F86 508 aaKnown RBP18.41■□□□□ 0.54
PDE6D-201ENST00000287600 P2RX7Q99572 595 aaKnown RBP18.41■□□□□ 0.54
PDE6D-201ENST00000287600 FEZ1Q99689 392 aa18.41■□□□□ 0.54
PDE6D-201ENST00000287600 CRISPLD2Q9H0B8 497 aa18.41■□□□□ 0.54
PDE6D-201ENST00000287600 GJD2Q9UKL4 321 aa18.41■□□□□ 0.54
PDE6D-201ENST00000287600 DDX60LQ5H9U9 1706 aaKnown RBP18.4■□□□□ 0.54
PDE6D-201ENST00000287600 TRIOBPQ9H2D6 2365 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 PEX10O60683 326 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 GH2P01242 217 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 TRIM32Q13049 653 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 SOCS4Q8WXH5 440 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 PAWRQ96IZ0 340 aaKnown RBP18.4■□□□□ 0.54
PDE6D-201ENST00000287600 HAUS7Q99871 368 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 HMX1Q9NP08 348 aaPredicted RBP18.4■□□□□ 0.54
PDE6D-201ENST00000287600 PAG1Q9NWQ8 432 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 ALPK3Q96L96 1907 aa18.4■□□□□ 0.54
PDE6D-201ENST00000287600 CYP2B6P20813 491 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 ZYXQ15942 572 aaKnown RBP18.39■□□□□ 0.53
PDE6D-201ENST00000287600 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L2Q6R6M4 530 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 NECAB2Q7Z6G3 386 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 CCAR1Q8IX12 1150 aaKnown RBP18.39■□□□□ 0.53
PDE6D-201ENST00000287600 DIS3LQ8TF46 1054 aaKnown RBP18.39■□□□□ 0.53
PDE6D-201ENST00000287600 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
PDE6D-201ENST00000287600 TRIB2Q92519 343 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 NUDT12Q9BQG2 462 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 PAGR1Q9BTK6 254 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 SERPINB13Q9UIV8 391 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 RPTORQ8N122 1335 aa18.39■□□□□ 0.53
PDE6D-201ENST00000287600 IGHDP01880 384 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 MAPK4P31152 587 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 ERVK-24P63145 666 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 SLC9C2Q5TAH2 1124 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 TTC6Q86TZ1 520 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 ANKLE1Q8NAG6 615 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 OTUD7AQ8TE49 926 aaPredicted RBP18.38■□□□□ 0.53
PDE6D-201ENST00000287600 EHD4Q9H223 541 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
PDE6D-201ENST00000287600 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
PDE6D-201ENST00000287600 RAB3GAP1Q15042 981 aa18.37■□□□□ 0.53
PDE6D-201ENST00000287600 TATDN1Q6P1N9 297 aa18.37■□□□□ 0.53
PDE6D-201ENST00000287600 TMED8Q6PL24 325 aaPredicted RBP18.37■□□□□ 0.53
PDE6D-201ENST00000287600 RBPJLQ9UBG7 517 aa18.37■□□□□ 0.53
PDE6D-201ENST00000287600 PDE6AP16499 860 aa18.36■□□□□ 0.53
PDE6D-201ENST00000287600 ZKSCAN1P17029 563 aaPredicted RBP18.36■□□□□ 0.53
PDE6D-201ENST00000287600 CERKLQ49MI3 558 aaPredicted RBP18.36■□□□□ 0.53
PDE6D-201ENST00000287600 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
PDE6D-201ENST00000287600 C12orf42Q96LP6 360 aa18.36■□□□□ 0.53
PDE6D-201ENST00000287600 MAGEB6P1A0A0J9YX57 407 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
PDE6D-201ENST00000287600 RGS2P41220 211 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 USP14P54578 494 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 ABCB5Q2M3G0 1257 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 GPR142Q7Z601 462 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 PORCNQ9H237 461 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 PRO3102Q9H379 93 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 CABP5Q9NP86 173 aa18.35■□□□□ 0.53
PDE6D-201ENST00000287600 TTC41PQ6P2S7 1318 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 ZNF532Q9HCE3 1301 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 POLR3DP05423 398 aaPredicted RBP18.34■□□□□ 0.53
PDE6D-201ENST00000287600 XRCC5P13010 732 aaKnown RBP18.34■□□□□ 0.53
PDE6D-201ENST00000287600 MX1P20591 662 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 Q3C1V9 767 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 PLEKHH3Q7Z736 793 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
PDE6D-201ENST00000287600 C7orf61Q8IZ16 206 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 APBA2Q99767 749 aa18.34■□□□□ 0.53
PDE6D-201ENST00000287600 RIOK1Q9BRS2 568 aaKnown RBP18.34■□□□□ 0.53
PDE6D-201ENST00000287600 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDE6D-201ENST00000287600 ERC2O15083 957 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 VCAM1P19320 739 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 PLCD1P51178 756 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 WDR78Q5VTH9 848 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 CRNKL1Q9BZJ0 848 aaKnown RBP18.33■□□□□ 0.52
PDE6D-201ENST00000287600 KIAA1683Q9H0B3 1180 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 C11orf49Q9H6J7 331 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 SSUH2Q9Y2M2 353 aa18.33■□□□□ 0.52
PDE6D-201ENST00000287600 MYH8P13535 1937 aa18.32■□□□□ 0.52
PDE6D-201ENST00000287600 SHMT1P34896 483 aa18.32■□□□□ 0.52
PDE6D-201ENST00000287600 CCNA1P78396 465 aa18.32■□□□□ 0.52
PDE6D-201ENST00000287600 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
PDE6D-201ENST00000287600 ACER1Q8TDN7 264 aa18.32■□□□□ 0.52
PDE6D-201ENST00000287600 LNPKQ9C0E8 428 aa18.32■□□□□ 0.52
PDE6D-201ENST00000287600 MCM9Q9NXL9 1143 aa18.32■□□□□ 0.52
PDE6D-201ENST00000287600 OGDHLQ9ULD0 1010 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms