RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 WASHC5Q12768 1159 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 CCDC93Q567U6 631 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 SOGA3Q5TF21 947 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 AGAP9Q5VTM2 703 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 XDHP47989 1333 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 B3GALNT1O75752 331 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 IL33O95760 270 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 IBSPP21815 317 aaPredicted RBP10.87□□□□□ -0.67
PDCD4-201ENST00000280154 ERCC5P28715 1186 aaPredicted RBP10.87□□□□□ -0.67
PDCD4-201ENST00000280154 PUM3Q15397 648 aaKnown RBP10.87□□□□□ -0.67
PDCD4-201ENST00000280154 CCDC57Q2TAC2 916 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 LPIN2Q92539 896 aa10.87□□□□□ -0.67
PDCD4-201ENST00000280154 EIF2AK1Q9BQI3 630 aaKnown RBP10.87□□□□□ -0.67
PDCD4-201ENST00000280154 MAGED1Q9Y5V3 778 aaPredicted RBP10.87□□□□□ -0.67
PDCD4-201ENST00000280154 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 FGFR1OPO95684 399 aaKnown RBP10.86□□□□□ -0.67
PDCD4-201ENST00000280154 BMP2KLQ5H9B9 411 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 HOOK3Q86VS8 718 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
PDCD4-201ENST00000280154 PUS3Q9BZE2 481 aaKnown RBP10.86□□□□□ -0.67
PDCD4-201ENST00000280154 AKAP2Q9Y2D5 859 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 FOSP01100 380 aaPredicted RBP10.86□□□□□ -0.67
PDCD4-201ENST00000280154 FAM163BP0C2L3 166 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 ERP27Q96DN0 273 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 ZMYND10O75800 440 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
PDCD4-201ENST00000280154 AP1ARQ63HQ0 302 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 TSPYL1Q9H0U9 437 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 PLSCR2Q9NRY7 297 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 SWAP70Q9UH65 585 aa10.86□□□□□ -0.67
PDCD4-201ENST00000280154 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 CHRNDQ07001 517 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 NFKBIBQ15653 356 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 MTERF4Q7Z6M4 381 aaKnown RBP10.85□□□□□ -0.67
PDCD4-201ENST00000280154 RELL1Q8IUW5 271 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 CACTIN-AS1Q8N1I8 211 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 MTRQ99707 1265 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 MRIQ9BWK5 157 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 SPON1Q9HCB6 807 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 DBNLQ9UJU6 430 aaKnown RBP10.85□□□□□ -0.67
PDCD4-201ENST00000280154 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 UQCRHLA0A096LP55 91 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
PDCD4-201ENST00000280154 TIMM44O43615 452 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 TMEM127O75204 238 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 UQCRHP07919 91 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 SPECC1Q5M775 1068 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 C14orf80Q86SX3 495 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 SLC43A3Q8NBI5 491 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 FAM161BQ96MY7 647 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 HAUS7Q99871 368 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 KMT5AQ9NQR1 393 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 CCAR1Q8IX12 1150 aaKnown RBP10.85□□□□□ -0.67
PDCD4-201ENST00000280154 RPUSD2Q8IZ73 545 aaKnown RBP10.85□□□□□ -0.67
PDCD4-201ENST00000280154 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
PDCD4-201ENST00000280154 MYH2Q9UKX2 1941 aa10.85□□□□□ -0.67
PDCD4-201ENST00000280154 SMTNL1A8MU46 457 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 PDE1AP54750 535 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 TFCP2Q12800 502 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 JAZF1Q86VZ6 243 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 NEBLO76041 1014 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 MCM2P49736 904 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 NAIF1Q69YI7 327 aaPredicted RBP10.84□□□□□ -0.67
PDCD4-201ENST00000280154 NT5DC4Q86YG4 428 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 DCLK2Q8N568 766 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 TDRD7Q8NHU6 1098 aaKnown RBP10.84□□□□□ -0.67
PDCD4-201ENST00000280154 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 PTPRHQ9HD43 1115 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 ZSCAN26Q16670 478 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 TTC39AQ5SRH9 613 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 ZNF449Q6P9G9 518 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 SPATA17Q96L03 361 aa10.84□□□□□ -0.67
PDCD4-201ENST00000280154 KLHL33A6NCF5 533 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 H0YIN7 160 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 GPSM2P81274 684 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 TTC22Q5TAA0 569 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 SYNE3Q6ZMZ3 975 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 C2CD5Q86YS7 1000 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 USP33Q8TEY7 942 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 RNF25Q96BH1 459 aaPredicted RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 DEF6Q9H4E7 631 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 RETREG1Q9H6L5 497 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 KIF1CO43896 1103 aaKnown RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 GSPT1P15170 499 aaKnown RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 FOSL1P15407 271 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 IGHMBP2P38935 993 aaKnown RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 DEUP1Q05D60 604 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 PRPF40BQ6NWY9 871 aaKnown RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 SMCR8Q8TEV9 937 aaPredicted RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 ZNF594Q96JF6 807 aaPredicted RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 SPC25Q9HBM1 224 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 ZMYM6O95789 1325 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 FAAH2Q6GMR7 532 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 TBC1D16Q8TBP0 767 aa10.83□□□□□ -0.68
PDCD4-201ENST00000280154 JARID2Q92833 1246 aaPredicted RBP10.83□□□□□ -0.68
PDCD4-201ENST00000280154 SURF6O75683 361 aaKnown RBP10.82□□□□□ -0.68
PDCD4-201ENST00000280154 DPEP1P16444 411 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms