RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TSPY3P0CV98 308 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 TSPY8P0CW00 308 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 CHMLP26374 656 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 IRX3P78415 501 aaPredicted RBP7.76□□□□□ -1.17
CD44-204ENST00000279452 PABPC4Q13310 644 aaKnown RBP eCLIP7.76□□□□□ -1.17
CD44-204ENST00000279452 BMP2KLQ5H9B9 411 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 FAM47AQ5JRC9 791 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 SAMD1Q6SPF0 538 aaPredicted RBP7.76□□□□□ -1.17
CD44-204ENST00000279452 KIAA1211Q6ZU35 1233 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 ANKRD23Q86SG2 305 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 CCDC17Q96LX7 622 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 PARK7Q99497 189 aaKnown RBP7.76□□□□□ -1.17
CD44-204ENST00000279452 SH2D4AQ9H788 454 aa7.76□□□□□ -1.17
CD44-204ENST00000279452 LAMB1P07942 1786 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
CD44-204ENST00000279452 GPR25O00155 361 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 ZNF213O14771 459 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 CDC45O75419 566 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 CAPN15O75808 1086 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 FGAP02671 866 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 CYP2C8P10632 490 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 RASA1P20936 1047 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 OSBPP22059 807 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 USP14P54578 494 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 BACE1P56817 501 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
CD44-204ENST00000279452 TREML2Q5T2D2 321 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 PROCA1Q8NCQ7 364 aaPredicted RBP7.75□□□□□ -1.17
CD44-204ENST00000279452 ACER1Q8TDN7 264 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 CPA4Q9UI42 421 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 CTNNA3Q9UI47 895 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 TAOK2Q9UL54 1235 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 AGTPBP1Q9UPW5 1226 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 ATAD5Q96QE3 1844 aa7.75□□□□□ -1.17
CD44-204ENST00000279452 BAZ2AQ9UIF9 1905 aaKnown RBP7.74□□□□□ -1.17
CD44-204ENST00000279452 C19orf81C9J6K1 198 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 FOXP2O15409 715 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 FKTNO75072 461 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 EEF2P13639 858 aaKnown RBP7.74□□□□□ -1.17
CD44-204ENST00000279452 TFAP4Q01664 338 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 KIF22Q14807 665 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 GPAT2Q6NUI2 795 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 MFSD6Q6ZSS7 791 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 SPICE1Q8N0Z3 855 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 ZNF296Q8WUU4 475 aaPredicted RBP7.74□□□□□ -1.17
CD44-204ENST00000279452 CHMP4CQ96CF2 233 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 DSCC1Q9BVC3 393 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 TANGO6Q9C0B7 1094 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 IL25Q9H293 177 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 R3HDMLQ9H3Y0 253 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 RNF41Q9H4P4 317 aaPredicted RBP7.74□□□□□ -1.17
CD44-204ENST00000279452 KANSL2Q9H9L4 492 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 GOPCQ9HD26 462 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 ZCCHC17Q9NP64 241 aaKnown RBP7.74□□□□□ -1.17
CD44-204ENST00000279452 ANO2Q9NQ90 1003 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 INCENPQ9NQS7 918 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 PRDM10Q9NQV6 1147 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 STX8Q9UNK0 236 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 MTMR7Q9Y216 660 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 ZMYM6O95789 1325 aa7.74□□□□□ -1.17
CD44-204ENST00000279452 SGSM2O43147 1006 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 TLR2O60603 784 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 VCAM1P19320 739 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 GUCY1A2P33402 732 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 SP3Q02447 781 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 MOGSQ13724 837 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 ALX1Q15699 326 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 SH3D19Q5HYK7 790 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 AKNAD1Q5T1N1 836 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 COL13A1Q5TAT6 717 aaPredicted RBP7.73□□□□□ -1.17
CD44-204ENST00000279452 TBC1D10CQ8IV04 446 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 CCAR1Q8IX12 1150 aaKnown RBP7.73□□□□□ -1.17
CD44-204ENST00000279452 TNS4Q8IZW8 715 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
CD44-204ENST00000279452 CD99L2Q8TCZ2 262 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 CEP95Q96GE4 821 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 ERO1AQ96HE7 468 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 ESYT1Q9BSJ8 1104 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 PAGR1Q9BTK6 254 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 KIAA1683Q9H0B3 1180 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 ASCC2Q9H1I8 757 aaPredicted RBP7.73□□□□□ -1.17
CD44-204ENST00000279452 RPAP3Q9H6T3 665 aaPredicted RBP7.73□□□□□ -1.17
CD44-204ENST00000279452 CWC22Q9HCG8 908 aaKnown RBP7.73□□□□□ -1.17
CD44-204ENST00000279452 EMILIN3Q9NT22 766 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 CLIP2Q9UDT6 1046 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 NEDD4P46934 1319 aa7.73□□□□□ -1.17
CD44-204ENST00000279452 A0A1W2PRG0 241 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L15C9J2P7 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L13C9JLJ4 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L11C9JVI0 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L18D6R9N7 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L22D6RA61 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L17D6RBQ6 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L19D6RCP7 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 USP17L20D6RJB6 530 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 TTLL1O95922 423 aa7.72□□□□□ -1.17
CD44-204ENST00000279452 PTH1RQ03431 593 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms