RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PAGE5Q96GU1 130 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 GREM2Q9H772 168 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 PSD3Q9NYI0 1048 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 RAB21Q9UL25 225 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 CIAO1O76071 339 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 KRT31Q15323 416 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 EPB41L4AQ9HCS5 686 aaPredicted RBP14.61□□□□□ -0.07
COL8A1-202ENST00000273342 POLD4Q9HCU8 107 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 IQSEC3Q9UPP2 1182 aaPredicted RBP14.61□□□□□ -0.07
COL8A1-202ENST00000273342 MYO1BO43795 1136 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 IVLP07476 585 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 NOP2P46087 812 aaKnown RBP14.61□□□□□ -0.07
COL8A1-202ENST00000273342 TDO2P48775 406 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 GTF2A1P52655 376 aaPredicted RBP14.61□□□□□ -0.07
COL8A1-202ENST00000273342 HNRNPLLQ8WVV9 542 aaKnown RBP14.61□□□□□ -0.07
COL8A1-202ENST00000273342 TMEM87BQ96K49 555 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 MMS19Q96T76 1030 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 EHD4Q9H223 541 aa14.61□□□□□ -0.07
COL8A1-202ENST00000273342 MINDY4BA8MYZ0 360 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 E2F4Q16254 413 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 TTC31Q49AM3 519 aaPredicted RBP14.6□□□□□ -0.07
COL8A1-202ENST00000273342 MFSD6Q6ZSS7 791 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 IFNL3Q8IZI9 196 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 SRPRBQ9Y5M8 271 aaKnown RBP14.6□□□□□ -0.07
COL8A1-202ENST00000273342 ZNF185O15231 689 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 ITGA6P23229 1130 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 ARHGAP25P42331 645 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 WTAPQ15007 396 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
COL8A1-202ENST00000273342 NT5DC1Q5TFE4 455 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 CNGA4Q8IV77 575 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 ABHD10Q9NUJ1 306 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 TBC1D2BQ9UPU7 963 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 ERCC5P28715 1186 aaPredicted RBP14.6□□□□□ -0.07
COL8A1-202ENST00000273342 USP5P45974 858 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 UBXN1Q04323 297 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 CCDC148Q8NFR7 591 aa14.6□□□□□ -0.07
COL8A1-202ENST00000273342 STRBPQ96SI9 672 aaKnown RBP14.6□□□□□ -0.07
COL8A1-202ENST00000273342 BAZ2BQ9UIF8 2168 aaKnown RBP14.59□□□□□ -0.07
COL8A1-202ENST00000273342 PPP1R3GB7ZBB8 358 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 ATP1A1P05023 1023 aaKnown RBP14.59□□□□□ -0.07
COL8A1-202ENST00000273342 IFNAR1P17181 557 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 CUL4BQ13620 913 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 PLIN2Q99541 437 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 TTF2Q9UNY4 1162 aaKnown RBP14.59□□□□□ -0.07
COL8A1-202ENST00000273342 TRIM75PA6NK02 468 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 MATR3P43243 847 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL8A1-202ENST00000273342 PIP4K2BP78356 416 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 CAGE1Q8TC20 777 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 FAM71BQ8TC56 605 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 PSMB7Q99436 277 aa14.59□□□□□ -0.07
COL8A1-202ENST00000273342 ERICH2A1L162 156 aa14.58□□□□□ -0.07
COL8A1-202ENST00000273342 TRIM49BA6NDI0 452 aa14.58□□□□□ -0.07
COL8A1-202ENST00000273342 MYBL2P10244 700 aa14.58□□□□□ -0.07
COL8A1-202ENST00000273342 HSPA2P54652 639 aa14.58□□□□□ -0.07
COL8A1-202ENST00000273342 MICALL1Q8N3F8 863 aa14.58□□□□□ -0.07
COL8A1-202ENST00000273342 CRACR2BQ8N4Y2 399 aaPredicted RBP14.58□□□□□ -0.07
COL8A1-202ENST00000273342 SHISA4Q96DD7 197 aa14.58□□□□□ -0.07
COL8A1-202ENST00000273342 OVOS2A0A0G2JMS6 1433 aa14.58□□□□□ -0.07
COL8A1-202ENST00000273342 PLEKHG2Q9H7P9 1386 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 GGCXP38435 758 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 TCIRG1Q13488 830 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 CTR9Q6PD62 1173 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 AFAP1L1Q8TED9 768 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL8A1-202ENST00000273342 WASF1Q92558 559 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 SMARCC1Q92922 1105 aaPredicted RBP14.58□□□□□ -0.08
COL8A1-202ENST00000273342 NAA15Q9BXJ9 866 aaKnown RBP14.58□□□□□ -0.08
COL8A1-202ENST00000273342 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 GDAQ9Y2T3 454 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 V9GY48 417 aaPredicted RBP14.58□□□□□ -0.08
COL8A1-202ENST00000273342 SYF2O95926 243 aaKnown RBP14.58□□□□□ -0.08
COL8A1-202ENST00000273342 PBX1P40424 430 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 CCDC122Q5T0U0 273 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 KANK3Q6NY19 840 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 SGMS1Q86VZ5 419 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 TRIML1Q8N9V2 468 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 GNL3LQ9NVN8 582 aaKnown RBP14.58□□□□□ -0.08
COL8A1-202ENST00000273342 DUSP10Q9Y6W6 482 aa14.58□□□□□ -0.08
COL8A1-202ENST00000273342 MACROD2A1Z1Q3 448 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 IRX3P78415 501 aaPredicted RBP14.57□□□□□ -0.08
COL8A1-202ENST00000273342 CDKAL1Q5VV42 579 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 CYP26C1Q6V0L0 522 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 TMTC1Q8IUR5 882 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 EPN1Q9Y6I3 576 aaPredicted RBP14.57□□□□□ -0.08
COL8A1-202ENST00000273342 GOLGB1Q14789 3259 aaKnown RBP14.57□□□□□ -0.08
COL8A1-202ENST00000273342 LIG3P49916 1009 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 WHAMMP3Q1A5X7 153 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 AKNAD1Q5T1N1 836 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 FANCBQ8NB91 859 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 TTLL11Q8NHH1 800 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
COL8A1-202ENST00000273342 REXO2Q9Y3B8 237 aaKnown RBP14.57□□□□□ -0.08
COL8A1-202ENST00000273342 JRKLQ9Y4A0 524 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 SLC4A4Q9Y6R1 1079 aa14.57□□□□□ -0.08
COL8A1-202ENST00000273342 TTC26A0AVF1 554 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 DEXIO95424 95 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 MAGEA9P43362 315 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 COPB1P53618 953 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms