RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SCAF11Q99590 1463 aaKnown RBP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 CSRNP1Q96S65 589 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 BAG1Q99933 345 aaPredicted RBP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 JPH2Q9BR39 696 aaPredicted RBP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 ADCY5O95622 1261 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 TROVE2P10155 538 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 ESRRGP62508 458 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 NMIQ13287 307 aaPredicted RBP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 JRKLQ9Y4A0 524 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 ARIH1Q9Y4X5 557 aaPredicted RBP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 RUFY4Q6ZNE9 571 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 IFT81Q8WYA0 676 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 BRF1Q92994 677 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 TRMT1Q9NXH9 659 aaKnown RBP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 MAP3K7O43318 606 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 TNFAIP3P21580 790 aa14.61□□□□□ -0.07
PRDM16-201ENST00000270722 DCAF17Q5H9S7 520 aaPredicted RBP14.61□□□□□ -0.07
PRDM16-201ENST00000270722 TRAF5O00463 557 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 NONOQ15233 471 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRDM16-201ENST00000270722 RHPN1Q8TCX5 695 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 ICE2Q659A1 982 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 CACTINQ8WUQ7 758 aaKnown RBP14.6□□□□□ -0.07
PRDM16-201ENST00000270722 IFT122Q9HBG6 1241 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 GNA14O95837 355 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 NT5C3AQ9H0P0 336 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 TRPM2O94759 1503 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 PRPF6O94906 941 aaKnown RBP14.6□□□□□ -0.07
PRDM16-201ENST00000270722 XPAP23025 273 aaPredicted RBP14.6□□□□□ -0.07
PRDM16-201ENST00000270722 ZBTB8OSQ8IWT0 167 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 CHURC1Q8WUH1 139 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 TMEM87BQ96K49 555 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 KCNK9Q9NPC2 374 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 PTPREP23469 700 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 SLC1A4P43007 532 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 CCDC25Q86WR0 208 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 PSDA5PKW4 1024 aaPredicted RBP14.6□□□□□ -0.07
PRDM16-201ENST00000270722 DONSONQ9NYP3 566 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 TMEM110-MUSTN1A8MSY1 372 aa14.6□□□□□ -0.07
PRDM16-201ENST00000270722 MARCKSP29966 332 aaPredicted RBP14.6□□□□□ -0.07
PRDM16-201ENST00000270722 LMNB1P20700 586 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 EP400NLQ6ZTU2 488 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 PPP4R1Q8TF05 950 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 YARSP54577 528 aaKnown RBP14.59□□□□□ -0.07
PRDM16-201ENST00000270722 PPP1R2P3Q6NXS1 205 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 WAPLQ7Z5K2 1190 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 EVCP57679 992 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.59□□□□□ -0.07
PRDM16-201ENST00000270722 SDCCAG3Q96C92 435 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 PPANQ9NQ55 473 aaKnown RBP14.59□□□□□ -0.07
PRDM16-201ENST00000270722 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
PRDM16-201ENST00000270722 SYT1P21579 422 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 LMTK3Q96Q04 1460 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 N4BP1O75113 896 aaKnown RBP14.59□□□□□ -0.07
PRDM16-201ENST00000270722 PHBP35232 272 aa14.59□□□□□ -0.07
PRDM16-201ENST00000270722 NME9Q86XW9 330 aa14.58□□□□□ -0.07
PRDM16-201ENST00000270722 USHBP1Q8N6Y0 703 aa14.58□□□□□ -0.07
PRDM16-201ENST00000270722 XAGE3Q8WTP9 111 aa14.58□□□□□ -0.07
PRDM16-201ENST00000270722 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.58□□□□□ -0.072e-6■■■■■ 59.5
PRDM16-201ENST00000270722 CCDC124Q96CT7 223 aaKnown RBP14.58□□□□□ -0.07
PRDM16-201ENST00000270722 ZBTB21Q9ULJ3 1066 aa14.58□□□□□ -0.07
PRDM16-201ENST00000270722 ABI1Q8IZP0 508 aa14.58□□□□□ -0.07
PRDM16-201ENST00000270722 PPP2R5DQ14738 602 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 KLHL40Q2TBA0 621 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 CABS1Q96KC9 395 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 KDM3AQ9Y4C1 1321 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 DNM3Q9UQ16 869 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 TIAM1Q13009 1591 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 RAPGEF1Q13905 1077 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 FCHSD1Q86WN1 690 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 ERO1AQ96HE7 468 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 GINS2Q9Y248 185 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 GNPATO15228 680 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 EVI5O60447 810 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 TTC22Q5TAA0 569 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 IRS4O14654 1257 aaPredicted RBP14.58□□□□□ -0.08
PRDM16-201ENST00000270722 PHEXP78562 749 aa14.58□□□□□ -0.08
PRDM16-201ENST00000270722 GLE1Q53GS7 698 aaKnown RBP14.58□□□□□ -0.08
PRDM16-201ENST00000270722 ELP1O95163 1332 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 SH3TC1Q8TE82 1336 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 DEXIO95424 95 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 RANBP1P43487 201 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 KRT25Q7Z3Z0 450 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 PROCA1Q8NCQ7 364 aaPredicted RBP14.57□□□□□ -0.08
PRDM16-201ENST00000270722 MYRIPQ8NFW9 859 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 ARHGEF2Q92974 986 aaKnown RBP14.57□□□□□ -0.08
PRDM16-201ENST00000270722 RIPOR2Q9Y4F9 1068 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 A0A1B0GVL5 298 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 DPP8Q6V1X1 898 aaPredicted RBP14.57□□□□□ -0.08
PRDM16-201ENST00000270722 GTF3C6Q969F1 213 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 ZNF513Q8N8E2 541 aaPredicted RBP14.57□□□□□ -0.08
PRDM16-201ENST00000270722 FLT4P35916 1363 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 PSMA4P25789 261 aaKnown RBP14.57□□□□□ -0.08
PRDM16-201ENST00000270722 SP4Q02446 784 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 SEPT2Q15019 361 aa14.57□□□□□ -0.08
PRDM16-201ENST00000270722 PUM3Q15397 648 aaKnown RBP14.57□□□□□ -0.08
PRDM16-201ENST00000270722 ATG3Q9NT62 314 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms