RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TSPY3P0CV98 308 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 TSPY8P0CW00 308 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 CDK8P49336 464 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 USP17L1Q7RTZ2 530 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 PODNQ7Z5L7 613 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 ZNF444Q8N0Y2 327 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-201ENST00000269318 KAT14Q9H8E8 782 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 ZNF287Q9HBT7 754 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 TTF2Q9UNY4 1162 aaKnown RBP19.21■□□□□ 0.67
CCDC40-201ENST00000269318 F8W031 263 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-201ENST00000269318 WDHD1O75717 1129 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-201ENST00000269318 TOB1P50616 345 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-201ENST00000269318 FAM43AQ8N2R8 423 aa19.2■□□□□ 0.66
CCDC40-201ENST00000269318 C7orf43Q8WVR3 580 aa19.2■□□□□ 0.66
CCDC40-201ENST00000269318 PHF20Q9BVI0 1012 aa19.2■□□□□ 0.66
CCDC40-201ENST00000269318 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.2■□□□□ 0.66
CCDC40-201ENST00000269318 MYH1P12882 1939 aa19.2■□□□□ 0.66
CCDC40-201ENST00000269318 A0A1B0GVL5 298 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 hCG_1642624A0A1W2PR95 340 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 KINO60870 393 aaKnown RBP19.19■□□□□ 0.66
CCDC40-201ENST00000269318 NDUFA8P51970 172 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 NR5A1Q13285 461 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 PNMA1Q8ND90 353 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 OXER1Q8TDS5 423 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 CNKSR1Q969H4 720 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 XBP1P17861 261 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 CMA1P23946 247 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 TRIM44Q96DX7 344 aaPredicted RBP19.19■□□□□ 0.66
CCDC40-201ENST00000269318 DBNDD1Q9H9R9 158 aa19.19■□□□□ 0.66
CCDC40-201ENST00000269318 G3V3G9 751 aa19.18■□□□□ 0.66
CCDC40-201ENST00000269318 MARCKSP29966 332 aaPredicted RBP19.18■□□□□ 0.66
CCDC40-201ENST00000269318 KIF5BP33176 963 aa19.18■□□□□ 0.66
CCDC40-201ENST00000269318 DCAF8Q5TAQ9 597 aa19.18■□□□□ 0.66
CCDC40-201ENST00000269318 HHIPL2Q6UWX4 724 aa19.18■□□□□ 0.66
CCDC40-201ENST00000269318 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
CCDC40-201ENST00000269318 ADAMTSL1Q8N6G6 1762 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 GRM4Q14833 912 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 RILPL1Q5EBL4 403 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 JMYQ8N9B5 988 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 NEDD1Q8NHV4 660 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 FAM200AQ8TCP9 573 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 KCNQ5Q9NR82 932 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 FKBP1AP62942 108 aaKnown RBP19.17■□□□□ 0.66
CCDC40-201ENST00000269318 NPY5RQ15761 445 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 TMEM47Q9BQJ4 181 aa19.17■□□□□ 0.66
CCDC40-201ENST00000269318 DDX4Q9NQI0 724 aaKnown RBP19.17■□□□□ 0.66
CCDC40-201ENST00000269318 NOVP48745 357 aa19.16■□□□□ 0.66
CCDC40-201ENST00000269318 SCNN1DP51172 638 aa19.16■□□□□ 0.66
CCDC40-201ENST00000269318 GABPAQ06546 454 aa19.16■□□□□ 0.66
CCDC40-201ENST00000269318 ANO6Q4KMQ2 910 aa19.16■□□□□ 0.66
CCDC40-201ENST00000269318 APOBEC3HQ6NTF7 200 aaKnown RBP19.16■□□□□ 0.66
CCDC40-201ENST00000269318 SASS6Q6UVJ0 657 aa19.16■□□□□ 0.66
CCDC40-201ENST00000269318 PDGFDQ9GZP0 370 aaPredicted RBP19.16■□□□□ 0.66
CCDC40-201ENST00000269318 FAM237AA0A1B0GTK4 181 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 KRT2P35908 639 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 PFKFB3Q16875 520 aaPredicted RBP19.15■□□□□ 0.66
CCDC40-201ENST00000269318 STRIP1Q5VSL9 837 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 TEKT1Q969V4 418 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 USP25Q9UHP3 1055 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 MAD2L2Q9UI95 211 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 HPSEQ9Y251 543 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 SCN9AQ15858 1988 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 C10orf71Q711Q0 1435 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 ECE2O60344 883 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 SCG2P13521 617 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 PFKFB1P16118 471 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 PICALMQ13492 652 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 DACT2Q5SW24 774 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 CDC42EP5Q6NZY7 148 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 SHC4Q6S5L8 630 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 STAG2Q8N3U4 1231 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 TNFRSF25Q93038 417 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 MRIQ9BWK5 157 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 RRAGDQ9NQL2 400 aaPredicted RBP19.15■□□□□ 0.66
CCDC40-201ENST00000269318 USP40Q9NVE5 1235 aa19.15■□□□□ 0.66
CCDC40-201ENST00000269318 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
CCDC40-201ENST00000269318 HS1BP3Q53T59 392 aa19.14■□□□□ 0.65
CCDC40-201ENST00000269318 STX8Q9UNK0 236 aa19.14■□□□□ 0.65
CCDC40-201ENST00000269318 PLIN4Q96Q06 1357 aa19.14■□□□□ 0.65
CCDC40-201ENST00000269318 CUTAO60888 179 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 ZNF202O95125 648 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 CRKP46108 304 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 SLC35G1Q2M3R5 365 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 RESP18Q5W5W9 173 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 ZDHHC15Q96MV8 337 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 CBX8Q9HC52 389 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 CABP5Q9NP86 173 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 PCDHB6Q9Y5E3 794 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 PALM3A6NDB9 673 aaPredicted RBP19.13■□□□□ 0.65
CCDC40-201ENST00000269318 VEGFAP15692 232 aaPredicted RBP19.13■□□□□ 0.65
CCDC40-201ENST00000269318 GNAQP50148 359 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 EARS2Q5JPH6 523 aaKnown RBP19.13■□□□□ 0.65
CCDC40-201ENST00000269318 CC2D2BQ6DHV5 1058 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 DEFB132Q7Z7B7 95 aa19.13■□□□□ 0.65
CCDC40-201ENST00000269318 RTN4Q9NQC3 1192 aaKnown RBP19.13■□□□□ 0.65
CCDC40-201ENST00000269318 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
CCDC40-201ENST00000269318 FAM205CA6NFA0 338 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 CAVIN2O95810 425 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 BAG6P46379 1132 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 647.6 ms