RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 RTN1Q16799 776 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 CATIPQ7Z7H3 387 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 KIAA0825Q8IV33 1275 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 ZKSCAN3Q9BRR0 538 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 GGA3Q9NZ52 723 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 SERPINA10Q9UK55 444 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 TSPY2A6NKD2 308 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 NPM3O75607 178 aaKnown RBP17.87■□□□□ 0.45
COPS3-201ENST00000268717 DGKHQ86XP1 1220 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 FANCBQ8NB91 859 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 FBXO18Q8NFZ0 1043 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 WASF1Q92558 559 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 DCPSQ96C86 337 aaKnown RBP17.87■□□□□ 0.45
COPS3-201ENST00000268717 SCAND2PQ9GZW5 306 aaPredicted RBP17.87■□□□□ 0.45
COPS3-201ENST00000268717 RBM28Q9NW13 759 aaKnown RBP17.87■□□□□ 0.45
COPS3-201ENST00000268717 ISY1Q9ULR0 285 aaKnown RBP17.87■□□□□ 0.45
COPS3-201ENST00000268717 ASTN2O75129 1339 aaPredicted RBP17.86■□□□□ 0.45
COPS3-201ENST00000268717 FOCADQ5VW36 1801 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 F8W031 263 aaPredicted RBP17.86■□□□□ 0.45
COPS3-201ENST00000268717 FMNL1O95466 1100 aaPredicted RBP17.86■□□□□ 0.45
COPS3-201ENST00000268717 NCLP19338 710 aaKnown RBP17.86■□□□□ 0.45
COPS3-201ENST00000268717 CRKP46108 304 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 DNM1Q05193 864 aaKnown RBP17.86■□□□□ 0.45
COPS3-201ENST00000268717 CST9Q5W186 159 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 APOBEC3HQ6NTF7 200 aaKnown RBP17.86■□□□□ 0.45
COPS3-201ENST00000268717 KRT26Q7Z3Y9 468 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 USP48Q86UV5 1035 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 C8orf76Q96K31 380 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 MAP3K14Q99558 947 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 MKNK2Q9HBH9 465 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 HDAC9Q9UKV0 1011 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 CNPY2Q9Y2B0 182 aa17.86■□□□□ 0.45
COPS3-201ENST00000268717 ECM29Q5VYK3 1845 aa17.85■□□□□ 0.45
COPS3-201ENST00000268717 WDHD1O75717 1129 aaPredicted RBP17.85■□□□□ 0.45
COPS3-201ENST00000268717 PLCD1P51178 756 aa17.85■□□□□ 0.45
COPS3-201ENST00000268717 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
COPS3-201ENST00000268717 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
COPS3-201ENST00000268717 WNT10BO00744 389 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 UBE2HP62256 183 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
COPS3-201ENST00000268717 TROAPQ12815 778 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 NBPF9Q3BBW0 867 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 ANGEL2Q5VTE6 544 aaKnown RBP17.84■□□□□ 0.45
COPS3-201ENST00000268717 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 TRIM22Q8IYM9 498 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 ZNF444Q8N0Y2 327 aaPredicted RBP17.84■□□□□ 0.45
COPS3-201ENST00000268717 JMYQ8N9B5 988 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 GPT2Q8TD30 523 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 MYL10Q9BUA6 226 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 USP40Q9NVE5 1235 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 CNTNAP1P78357 1384 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 PLIN4Q96Q06 1357 aa17.84■□□□□ 0.45
COPS3-201ENST00000268717 CELF2O95319 508 aaKnown RBP17.83■□□□□ 0.45
COPS3-201ENST00000268717 RXRAP19793 462 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 RASA1P20936 1047 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 TFAP4Q01664 338 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 CDC42EP5Q6NZY7 148 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 BRAPQ7Z569 592 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 DYNLL2Q96FJ2 89 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 SAP30BPQ9UHR5 308 aaKnown RBP17.83■□□□□ 0.45
COPS3-201ENST00000268717 CFAP45Q9UL16 551 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 PITPNM2Q9BZ72 1349 aa17.83■□□□□ 0.45
COPS3-201ENST00000268717 ADM5C9JUS6 153 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 CDK8P49336 464 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 GABPAQ06546 454 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 SLC4A8Q2Y0W8 1093 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 FOXD4L6Q3SYB3 417 aaPredicted RBP17.83■□□□□ 0.44
COPS3-201ENST00000268717 FAM47AQ5JRC9 791 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 DLK2Q6UY11 383 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 FOXD4L3Q6VB84 417 aaPredicted RBP17.83■□□□□ 0.44
COPS3-201ENST00000268717 SULF1Q8IWU6 871 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 CRACR2BQ8N4Y2 399 aaPredicted RBP17.83■□□□□ 0.44
COPS3-201ENST00000268717 ZBED3Q96IU2 234 aaPredicted RBP17.83■□□□□ 0.44
COPS3-201ENST00000268717 ALG1Q9BT22 464 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 IDI2Q9BXS1 227 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 RNF26Q9BY78 433 aaPredicted RBP17.83■□□□□ 0.44
COPS3-201ENST00000268717 SWAP70Q9UH65 585 aa17.83■□□□□ 0.44
COPS3-201ENST00000268717 ABT1Q9ULW3 272 aaKnown RBP17.83■□□□□ 0.44
COPS3-201ENST00000268717 RASSF10A6NK89 507 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 FIBPO43427 364 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 DEXIO95424 95 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 TSPY3P0CV98 308 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 TSPY8P0CW00 308 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 RCSD1Q6JBY9 416 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 NBPF11Q86T75 865 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 CCDC144CPQ8IYA2 1237 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 NEDD1Q8NHV4 660 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 OSBPL5Q9H0X9 879 aaPredicted RBP17.82■□□□□ 0.44
COPS3-201ENST00000268717 EHD4Q9H223 541 aa17.82■□□□□ 0.44
COPS3-201ENST00000268717 MYH1P12882 1939 aa17.81■□□□□ 0.44
COPS3-201ENST00000268717 NOVP48745 357 aa17.81■□□□□ 0.44
COPS3-201ENST00000268717 SYAP1Q96A49 352 aaPredicted RBP17.81■□□□□ 0.44
COPS3-201ENST00000268717 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
COPS3-201ENST00000268717 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
COPS3-201ENST00000268717 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
COPS3-201ENST00000268717 GDPD2Q9HCC8 539 aa17.81■□□□□ 0.44
COPS3-201ENST00000268717 COL2A1P02458 1487 aaPredicted RBP17.8■□□□□ 0.44
COPS3-201ENST00000268717 DEFB115Q30KQ5 88 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms