RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 LPIN2Q92539 896 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 RABGGTAQ92696 567 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 SRPRBQ9Y5M8 271 aaKnown RBP14.06□□□□□ -0.16
CHMP3-201ENST00000263856 ADGRG1Q9Y653 693 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 CCDC196A0A1B0GTZ2 297 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 N4BP1O75113 896 aaKnown RBP14.06□□□□□ -0.16
CHMP3-201ENST00000263856 MCM7P33993 719 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 ADAMTS7Q9UKP4 1686 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 CTAGE9A4FU28 777 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 ENC1O14682 589 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 DZIP3Q86Y13 1208 aaKnown RBP14.06□□□□□ -0.16
CHMP3-201ENST00000263856 C10orf67Q8IYJ2 551 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 PAGE5Q96GU1 130 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 PNKPQ96T60 521 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 FOXP1Q9H334 677 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-201ENST00000263856 PDE8AO60658 829 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 KRT2P35908 639 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 TNNT3P45378 269 aaPredicted RBP14.05□□□□□ -0.16
CHMP3-201ENST00000263856 RAD51AP2Q09MP3 1159 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 ZSCAN26Q16670 478 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 KANK3Q6NY19 840 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 SRGAP1Q7Z6B7 1085 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 TXLNBQ8N3L3 684 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 CAPZA3Q96KX2 299 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 AK7Q96M32 723 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 FUT8Q9BYC5 575 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 MYH7P12883 1935 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
CHMP3-201ENST00000263856 PPARAQ07869 468 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
CHMP3-201ENST00000263856 SPATA1Q5VX52 437 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 RSRC2Q7L4I2 434 aaKnown RBP14.05□□□□□ -0.16
CHMP3-201ENST00000263856 TRIM10Q9UDY6 481 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 CAMTA1Q9Y6Y1 1673 aa14.05□□□□□ -0.16
CHMP3-201ENST00000263856 A0A1B0GTH6 734 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 PIK3AP1Q6ZUJ8 805 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 TRIM34Q9BYJ4 488 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 ABCB6Q9NP58 842 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 ADAM21Q9UKJ8 722 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 JAG2Q9Y219 1238 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 MYH8P13535 1937 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 MFAP3LO75121 409 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 FAM193AP78312 1265 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 VGLL2Q8N8G2 317 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 TMEM51Q9NW97 253 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 FAM237AA0A1B0GTK4 181 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 CAPN2P17655 700 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 SARSP49591 514 aaKnown RBP14.04□□□□□ -0.16
CHMP3-201ENST00000263856 DPYDQ12882 1025 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 PTGDRQ13258 359 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 PCMTD1Q96MG8 357 aaPredicted RBP14.04□□□□□ -0.16
CHMP3-201ENST00000263856 PLEKHA4Q9H4M7 779 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 CDC23Q9UJX2 597 aa14.04□□□□□ -0.16
CHMP3-201ENST00000263856 SPATA31A3Q5VYP0 1347 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 WTIPA6NIX2 430 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-201ENST00000263856 GYPCP04921 128 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 KRT9P35527 623 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 DYNLL1P63167 89 aaKnown RBP14.03□□□□□ -0.16
CHMP3-201ENST00000263856 BRMS1Q9HCU9 246 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 SPEF2Q9C093 1822 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 TNS3Q68CZ2 1445 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 CTAGE15A4D2H0 777 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 ANKRD65E5RJM6 399 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 NMT2O60551 498 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 ZMYND10O75800 440 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 CTAGE8P0CG41 777 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 ARID4AP29374 1257 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-201ENST00000263856 NLRP5P59047 1200 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 UBXN1Q04323 297 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 CTAGE6Q86UF2 777 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 CTAGE4Q8IX94 777 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 FAN1Q9Y2M0 1017 aa14.03□□□□□ -0.16
CHMP3-201ENST00000263856 ABCC12Q96J65 1359 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.16
CHMP3-201ENST00000263856 MYO1BO43795 1136 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 GYG1P46976 350 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 EVX2Q03828 476 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 CUL4BQ13620 913 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 TTC38Q5R3I4 469 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 CATIPQ7Z7H3 387 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 CEP112Q8N8E3 955 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 TRIML1Q8N9V2 468 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 ESR2Q92731 530 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 ADD3Q9UEY8 706 aaKnown RBP14.02□□□□□ -0.16
CHMP3-201ENST00000263856 GDAQ9Y2T3 454 aa14.02□□□□□ -0.16
CHMP3-201ENST00000263856 TRIM49BA6NDI0 452 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 ERLIN1O75477 346 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 ERCC5P28715 1186 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-201ENST00000263856 VSNL1P62760 191 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 KRT31Q15323 416 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 FAM47AQ5JRC9 791 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 LEKR1Q6ZMV7 388 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 ADGRA1Q86SQ6 560 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms