RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ZBTB48P10074 688 aaPredicted RBP19.62■□□□□ 0.73
CHCHD3-201ENST00000262570 CYP4F22Q6NT55 531 aa19.62■□□□□ 0.73
CHCHD3-201ENST00000262570 SIAH1Q8IUQ4 282 aa19.62■□□□□ 0.73
CHCHD3-201ENST00000262570 CEP95Q96GE4 821 aa19.62■□□□□ 0.73
CHCHD3-201ENST00000262570 AS3MTQ9HBK9 375 aa19.62■□□□□ 0.73
CHCHD3-201ENST00000262570 MTMR4Q9NYA4 1195 aa19.62■□□□□ 0.73
CHCHD3-201ENST00000262570 ICA1Q05084 483 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 PAXIP1Q6ZW49 1069 aaPredicted RBP19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 CLEC10AQ8IUN9 316 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 MB21D2Q8IYB1 491 aaPredicted RBP19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 ZNF280CQ8ND82 737 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 NEK1Q96PY6 1258 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 GREB1LQ9C091 1923 aaPredicted RBP19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 ATAD5Q96QE3 1844 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 NMT2O60551 498 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 NOVP48745 357 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 SPP2Q13103 211 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 COL9A3Q14050 684 aaPredicted RBP19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 CYB5R4Q7L1T6 521 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 NYAP2Q9P242 653 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 KCNH4Q9UQ05 1017 aa19.61■□□□□ 0.73
CHCHD3-201ENST00000262570 A0A1W2PRG0 241 aa19.6■□□□□ 0.73
CHCHD3-201ENST00000262570 CXCL11O14625 94 aa19.6■□□□□ 0.73
CHCHD3-201ENST00000262570 EEF2P13639 858 aaKnown RBP19.6■□□□□ 0.73
CHCHD3-201ENST00000262570 ANAPC15P60006 121 aa19.6■□□□□ 0.73
CHCHD3-201ENST00000262570 IQCA1Q86XH1 822 aa19.6■□□□□ 0.73
CHCHD3-201ENST00000262570 ACER1Q8TDN7 264 aa19.6■□□□□ 0.73
CHCHD3-201ENST00000262570 CAPNS2Q96L46 248 aa19.6■□□□□ 0.73
CHCHD3-201ENST00000262570 TRIM75PA6NK02 468 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 TTLL1O95922 423 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 ECE1P42892 770 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 BACE1P56817 501 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 MKRN3Q13064 507 aaKnown RBP19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 PPP4R3BQ5MIZ7 849 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 IL17RAQ96F46 866 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 ZKSCAN3Q9BRR0 538 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 CEP350Q5VT06 3117 aa19.59■□□□□ 0.73
CHCHD3-201ENST00000262570 ANTXR2P58335 489 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 CCDC178Q5BJE1 867 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 MKL1Q969V6 931 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 MS4A4AQ96JQ5 239 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 JAKMIP1Q96N16 626 aaKnown RBP19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 TTC14Q96N46 770 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 ZSCAN10Q96SZ4 725 aaPredicted RBP19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 C22orf23Q9BZE7 217 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 ARHGEF10LQ9HCE6 1279 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 CLIP2Q9UDT6 1046 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 STX8Q9UNK0 236 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 TMX2Q9Y320 296 aa19.58■□□□□ 0.73
CHCHD3-201ENST00000262570 WDR33Q9C0J8 1336 aaKnown RBP19.58■□□□□ 0.72
CHCHD3-201ENST00000262570 HMGB1P09429 215 aaKnown RBP19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 PSMA5P28066 241 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 MCM5P33992 734 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 VEGFBP49765 207 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 GTF2A2P52657 109 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 NOGQ13253 232 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 GRM1Q13255 1194 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 SNAPC2Q13487 334 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 RCSD1Q6JBY9 416 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 CHST3Q7LGC8 479 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 DGKHQ86XP1 1220 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 KIAA1683Q9H0B3 1180 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 PHIPQ8WWQ0 1821 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 A0A0G2JLL6 359 aaPredicted RBP19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 C19orf81C9J6K1 198 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 RBM25P49756 843 aaKnown RBP19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 EXOSC10Q01780 885 aaKnown RBP19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 ATP2B2Q01814 1243 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 MTMR2Q13614 643 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 SH3D19Q5HYK7 790 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 DHX32Q7L7V1 743 aaKnown RBP19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 PRRT2Q7Z6L0 340 aaPredicted RBP19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 UBAC1Q9BSL1 405 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 MTA3Q9BTC8 594 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 TM6SF1Q9BZW5 370 aa19.57■□□□□ 0.72
CHCHD3-201ENST00000262570 TNKSO95271 1327 aa19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 PRC1O43663 620 aa19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 SEC23AQ15436 765 aa19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 ANKS1AQ92625 1134 aa19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 ZIC5Q96T25 663 aa19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 SH2D4AQ9H788 454 aa19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 SYNPO2Q9UMS6 1093 aa19.56■□□□□ 0.72
CHCHD3-201ENST00000262570 AOC2O75106 756 aa19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 CASTP20810 708 aaKnown RBP19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 USP14P54578 494 aa19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 HMGCS2P54868 508 aa19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 BLOC1S2Q6QNY1 142 aa19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 IGDCC4Q8TDY8 1250 aa19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 FEZ1Q99689 392 aa19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 ZSWIM6Q9HCJ5 1215 aa19.55■□□□□ 0.72
CHCHD3-201ENST00000262570 WDR19Q8NEZ3 1342 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 TESPA1A2RU30 521 aaPredicted RBP19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 MANSC4A6NHS7 340 aaPredicted RBP19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 IFIT3O14879 490 aaKnown RBP19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 CETPP11597 493 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 CPA1P15085 419 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 KIF23Q02241 960 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms