RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 TGFBRAP1Q8WUH2 860 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 RTFDC1Q9BY42 306 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 MKNK2Q9HBH9 465 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 POLLQ9UGP5 575 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 ANKRD31Q8N7Z5 1873 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 LTBP1Q14766 1721 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 PPEF1O14829 653 aaPredicted RBP14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 OFD1O75665 1012 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 KIF5BP33176 963 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 KRT2P35908 639 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 ZNF75DP51815 510 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 NR5A1Q13285 461 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 SLC4A8Q2Y0W8 1093 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 SP8Q8IXZ3 490 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 SPC24Q8NBT2 197 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 PHF20Q9BVI0 1012 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 KAT14Q9H8E8 782 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 BRMS1Q9HCU9 246 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
SPTLC1-201ENST00000262554 CNTNAP5Q8WYK1 1306 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 BTDP43251 543 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 RBM6P78332 1123 aaKnown RBP14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 MFSD14BQ5SR56 506 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 PLA2G4DQ86XP0 818 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 DGKHQ86XP1 1220 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 NLGN1Q8N2Q7 840 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 OXER1Q8TDS5 423 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 NAP1L5Q96NT1 182 aaPredicted RBP14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 CLIC6Q96NY7 704 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 ZNF287Q9HBT7 754 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 NRXN2Q9P2S2 1712 aa14.87□□□□□ -0.03
SPTLC1-201ENST00000262554 GPR75-ASB3A0A0A6YYF3 556 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 RCSD1Q6JBY9 416 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 SARM1Q6SZW1 724 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 DRC7Q8IY82 874 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 SRBD1Q8N5C6 995 aaKnown RBP14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 DYNLL2Q96FJ2 89 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 ZNF830Q96NB3 372 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 TTC12Q9H892 705 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 CABP5Q9NP86 173 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 TSPY3P0CV98 308 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 TSPY8P0CW00 308 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 NLRP12P59046 1061 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 MAPKAPK5Q8IW41 473 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 DHX40Q8IX18 779 aaKnown RBP14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 ZNF444Q8N0Y2 327 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 ANKS1AQ92625 1134 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 FAM163AQ96GL9 167 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 BPIFA3Q9BQP9 254 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 FAM13BQ9NYF5 915 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 ATP6V0A2Q9Y487 856 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 PCDHB6Q9Y5E3 794 aa14.86□□□□□ -0.03
SPTLC1-201ENST00000262554 MYH1P12882 1939 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 A0A087WWV3 80 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 PLSCR1O15162 318 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 PTPREP23469 700 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 CDC25BP30305 580 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 FBXW7Q969H0 707 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 TCP11L1Q9NUJ3 509 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 FBXO2Q9UK22 296 aaPredicted RBP14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 FAM205AQ6ZU69 1335 aa14.85□□□□□ -0.03
SPTLC1-201ENST00000262554 TRIM75PA6NK02 468 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 SCG2P13521 617 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 PNMA1Q8ND90 353 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 FLAD1Q8NFF5 587 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 SHISA4Q96DD7 197 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 IL17RBQ9NRM6 502 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 HOOK1Q9UJC3 728 aaKnown RBP14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 MORC2Q9Y6X9 1032 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 FOCADQ5VW36 1801 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 NPR1P16066 1061 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 ATP2B1P20020 1258 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 DPCR1Q3MIW9 517 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 ZNF772Q68DY9 489 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 COL23A1Q86Y22 540 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 COA1Q9GZY4 146 aa14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 SRPRBQ9Y5M8 271 aaKnown RBP14.84□□□□□ -0.03
SPTLC1-201ENST00000262554 GAKO14976 1311 aa14.83□□□□□ -0.03
SPTLC1-201ENST00000262554 BIN1O00499 593 aa14.83□□□□□ -0.04
SPTLC1-201ENST00000262554 BMP15O95972 392 aa14.83□□□□□ -0.04
SPTLC1-201ENST00000262554 APBA3O96018 575 aa14.83□□□□□ -0.04
SPTLC1-201ENST00000262554 SRGNP10124 158 aa14.83□□□□□ -0.04
SPTLC1-201ENST00000262554 GNAQP50148 359 aa14.83□□□□□ -0.04
SPTLC1-201ENST00000262554 PLCD1P51178 756 aa14.83□□□□□ -0.04
SPTLC1-201ENST00000262554 PFKFB3Q16875 520 aaPredicted RBP14.83□□□□□ -0.04
SPTLC1-201ENST00000262554 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms