RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 BSPRYQ5W0U4 402 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 KSR1Q8IVT5 923 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 ST7Q9NRC1 585 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 ATP2A1O14983 1001 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 LPXNO60711 386 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 POLA2Q14181 598 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 KIF22Q14807 665 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 PGBD1Q96JS3 809 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 NAP1L4Q99733 375 aaKnown RBP13.56□□□□□ -0.24
SPG11-201ENST00000261866 SYNJ2BP-COX16A0A087WUM0 186 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
SPG11-201ENST00000261866 SNX16P57768 344 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 SNAP25P60880 206 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPG11-201ENST00000261866 COX16Q9P0S2 106 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 ZEB2O60315 1214 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 ZBTB16Q05516 673 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 BIRC2Q13490 618 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 NAA25Q14CX7 972 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 PPP1R12AO14974 1030 aaPredicted RBP13.55□□□□□ -0.24
SPG11-201ENST00000261866 GADD45BO75293 160 aaPredicted RBP13.55□□□□□ -0.24
SPG11-201ENST00000261866 KCTD1Q719H9 257 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 EEPD1Q7L9B9 569 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 MICALCLQ6ZW33 695 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 TAB3Q8N5C8 712 aaPredicted RBP13.55□□□□□ -0.24
SPG11-201ENST00000261866 SMC1BQ8NDV3 1235 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
SPG11-201ENST00000261866 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 MMS19Q96T76 1030 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 CRCPO75575 148 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 FAM204AQ9H8W3 233 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 ZBTB1Q9Y2K1 713 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 YEATS2Q9ULM3 1422 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 AKR1B15C9JRZ8 316 aaPredicted RBP13.55□□□□□ -0.24
SPG11-201ENST00000261866 PTH1RQ03431 593 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 AS3MTQ9HBK9 375 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 EXOC7Q9UPT5 735 aa13.55□□□□□ -0.24
SPG11-201ENST00000261866 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
SPG11-201ENST00000261866 PHKA1P46020 1223 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 ZSCAN10Q96SZ4 725 aaPredicted RBP13.54□□□□□ -0.24
SPG11-201ENST00000261866 BAG1Q99933 345 aaPredicted RBP13.54□□□□□ -0.24
SPG11-201ENST00000261866 MAP7D1Q3KQU3 841 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 IFNL3Q8IZI9 196 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 MYL5Q02045 173 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 INF2Q27J81 1249 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 RABEP2Q9H5N1 569 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 ABT1Q9ULW3 272 aaKnown RBP13.54□□□□□ -0.24
SPG11-201ENST00000261866 PAXBP1Q9Y5B6 917 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 SLC16A2P36021 539 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 SEPT14Q6ZU15 432 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 NELFBQ8WX92 580 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 HOOK2Q96ED9 719 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 CCDC77Q9BR77 488 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 PAK1Q13153 545 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 REXO1Q8N1G1 1221 aaKnown RBP13.54□□□□□ -0.24
SPG11-201ENST00000261866 PSTPIP2Q9H939 334 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 ANKFY1Q9P2R3 1169 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 YARSP54577 528 aaKnown RBP13.54□□□□□ -0.24
SPG11-201ENST00000261866 ICA1Q05084 483 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 ZBTB38Q8NAP3 1195 aaPredicted RBP13.54□□□□□ -0.24
SPG11-201ENST00000261866 DEPTORQ8TB45 409 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 SNX21Q969T3 373 aa13.54□□□□□ -0.24
SPG11-201ENST00000261866 SERPINB2P05120 415 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 SMC5Q8IY18 1101 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 RSPH14Q9UHP6 348 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPG11-201ENST00000261866 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
SPG11-201ENST00000261866 TLR7Q9NYK1 1049 aaKnown RBP13.53□□□□□ -0.24
SPG11-201ENST00000261866 GAS8O95995 478 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 DCUN1D2Q6PH85 259 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 ZNF335Q9H4Z2 1342 aaPredicted RBP13.53□□□□□ -0.24
SPG11-201ENST00000261866 XRCC6P12956 609 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPG11-201ENST00000261866 XKR9Q5GH70 373 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 TBC1D22AQ8WUA7 517 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 EEF2KMTQ96G04 330 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 ZNF804BA4D1E1 1349 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 SGSM2O43147 1006 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 ZNF654Q8IZM8 581 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 PALD1Q9ULE6 856 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 CETN3O15182 167 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 ATP2B4P23634 1241 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
SPG11-201ENST00000261866 CFAP157Q5JU67 520 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 NLRC4Q9NPP4 1024 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 CTTNBP2NLQ9P2B4 639 aa13.53□□□□□ -0.24
SPG11-201ENST00000261866 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
SPG11-201ENST00000261866 CYP4A11Q02928 519 aa13.52□□□□□ -0.24
SPG11-201ENST00000261866 DPP9Q86TI2 863 aa13.52□□□□□ -0.24
SPG11-201ENST00000261866 GPBP1Q86WP2 473 aa13.52□□□□□ -0.24
SPG11-201ENST00000261866 SPC25Q9HBM1 224 aa13.52□□□□□ -0.24
SPG11-201ENST00000261866 CCPG1Q9ULG6 757 aa13.52□□□□□ -0.24
SPG11-201ENST00000261866 CAVIN2O95810 425 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms