RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 HPS5Q9UPZ3 1129 aa20.46■□□□□ 0.87
SRSF1-201ENST00000258962 JAK2O60674 1132 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 CTDNEP1O95476 244 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 PCP11498 1178 aaKnown RBP20.45■□□□□ 0.86
SRSF1-201ENST00000258962 SYT1P21579 422 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 CCT2P78371 535 aaKnown RBP20.45■□□□□ 0.86
SRSF1-201ENST00000258962 MAP3K9P80192 1104 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 RASAL3Q86YV0 1011 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 GBP4Q96PP9 640 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 CSRNP1Q96S65 589 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 ZNF341Q9BYN7 854 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 NCOA5Q9HCD5 579 aaKnown RBP20.45■□□□□ 0.86
SRSF1-201ENST00000258962 MCM9Q9NXL9 1143 aa20.45■□□□□ 0.86
SRSF1-201ENST00000258962 ROBO3Q96MS0 1386 aa20.44■□□□□ 0.86
SRSF1-201ENST00000258962 TMEM67Q5HYA8 995 aa20.44■□□□□ 0.86
SRSF1-201ENST00000258962 C12orf60Q5U649 245 aa20.44■□□□□ 0.86
SRSF1-201ENST00000258962 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-201ENST00000258962 NSUN7Q8NE18 718 aaKnown RBP20.44■□□□□ 0.86
SRSF1-201ENST00000258962 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-201ENST00000258962 LLPHQ9BRT6 129 aaKnown RBP20.44■□□□□ 0.86
SRSF1-201ENST00000258962 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-201ENST00000258962 CSADQ9Y600 493 aa20.44■□□□□ 0.86
SRSF1-201ENST00000258962 GOLGA8BA8MQT2 603 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 STX6O43752 255 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 ORC4O43929 436 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 BAG4O95429 457 aaKnown RBP20.43■□□□□ 0.86
SRSF1-201ENST00000258962 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
SRSF1-201ENST00000258962 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
SRSF1-201ENST00000258962 KIF23Q02241 960 aaPredicted RBP20.43■□□□□ 0.86
SRSF1-201ENST00000258962 SGMS1Q86VZ5 419 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 MAPKAPK5Q8IW41 473 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 ESR2Q92731 530 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 CLMNQ96JQ2 1002 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 IFIT3O14879 490 aaKnown RBP20.43■□□□□ 0.86
SRSF1-201ENST00000258962 LIFRP42702 1097 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.43■□□□□ 0.86
SRSF1-201ENST00000258962 WRNIP1Q96S55 665 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 ZKSCAN3Q9BRR0 538 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 MTA3Q9BTC8 594 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
SRSF1-201ENST00000258962 WBP1LQ9NX94 342 aa20.43■□□□□ 0.86
SRSF1-201ENST00000258962 FLT1P17948 1338 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 DDTLA6NHG4 134 aaPredicted RBP20.42■□□□□ 0.86
SRSF1-201ENST00000258962 PRDM1O75626 825 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 SLC4A8Q2Y0W8 1093 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 SH3BP5LQ7L8J4 393 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 RAB11FIP4Q86YS3 637 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 REM2Q8IYK8 340 aaPredicted RBP20.42■□□□□ 0.86
SRSF1-201ENST00000258962 ZIC5Q96T25 663 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 MTMR6Q9Y217 621 aa20.42■□□□□ 0.86
SRSF1-201ENST00000258962 PTPDC1A2A3K4 754 aa20.41■□□□□ 0.86
SRSF1-201ENST00000258962 ZSCAN22P10073 491 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-201ENST00000258962 MKRN3Q13064 507 aaKnown RBP20.41■□□□□ 0.86
SRSF1-201ENST00000258962 SPRYD7Q5W111 196 aa20.41■□□□□ 0.86
SRSF1-201ENST00000258962 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-201ENST00000258962 DHX36Q9H2U1 1008 aaKnown RBP20.41■□□□□ 0.86
SRSF1-201ENST00000258962 SAP30BPQ9UHR5 308 aaKnown RBP20.41■□□□□ 0.86
SRSF1-201ENST00000258962 SLC3A2P08195 630 aaKnown RBP20.4■□□□□ 0.86
SRSF1-201ENST00000258962 VGLL4Q14135 290 aa20.4■□□□□ 0.86
SRSF1-201ENST00000258962 SEC23AQ15436 765 aa20.4■□□□□ 0.86
SRSF1-201ENST00000258962 CHAMP1Q96JM3 812 aa20.4■□□□□ 0.86
SRSF1-201ENST00000258962 ELP3Q9H9T3 547 aa20.4■□□□□ 0.86
SRSF1-201ENST00000258962 TCHHQ07283 1943 aa20.39■□□□□ 0.86
SRSF1-201ENST00000258962 DDX11L8A8MPP1 907 aa20.39■□□□□ 0.85
SRSF1-201ENST00000258962 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.85
SRSF1-201ENST00000258962 SART3Q15020 963 aaKnown RBP20.39■□□□□ 0.85
SRSF1-201ENST00000258962 LARP1BQ659C4 914 aaKnown RBP20.39■□□□□ 0.85
SRSF1-201ENST00000258962 ZKSCAN4Q969J2 545 aaPredicted RBP20.39■□□□□ 0.85
SRSF1-201ENST00000258962 DDX11Q96FC9 970 aa20.39■□□□□ 0.85
SRSF1-201ENST00000258962 DYNLL2Q96FJ2 89 aa20.39■□□□□ 0.85
SRSF1-201ENST00000258962 NID2Q14112 1375 aa20.39■□□□□ 0.85
SRSF1-201ENST00000258962 ATRNL1Q5VV63 1379 aa20.39■□□□□ 0.85
SRSF1-201ENST00000258962 TNKSO95271 1327 aa20.39■□□□□ 0.85
SRSF1-201ENST00000258962 ZBTB48P10074 688 aaPredicted RBP20.38■□□□□ 0.85
SRSF1-201ENST00000258962 PTMSP20962 102 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 PLCD1P51178 756 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 WTAPQ15007 396 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 NFXL1Q6ZNB6 911 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 WNK4Q96J92 1243 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 UBAC1Q9BSL1 405 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 PI4KBQ9UBF8 816 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 MYH8P13535 1937 aa20.38■□□□□ 0.85
SRSF1-201ENST00000258962 ZBTB43O43298 467 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 POLR3DP05423 398 aaPredicted RBP20.37■□□□□ 0.85
SRSF1-201ENST00000258962 PDCP20941 246 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 PDE4BQ07343 736 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 AMOTL1Q8IY63 956 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 CHMP4CQ96CF2 233 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 OPTNQ96CV9 577 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 ZSCAN10Q96SZ4 725 aaPredicted RBP20.37■□□□□ 0.85
SRSF1-201ENST00000258962 TRIM34Q9BYJ4 488 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.37■□□□□ 0.85
SRSF1-201ENST00000258962 ZNF112Q9UJU3 913 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 ERICH2A1L162 156 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 CCDC69A6NI79 296 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 CA12O43570 354 aa20.37■□□□□ 0.85
SRSF1-201ENST00000258962 TBC1D12O60347 775 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms