RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 NDC80O14777 642 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 RPS6KB1P23443 525 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 TRPC3Q13507 836 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 CPXCR1Q8N123 301 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 LAD1O00515 517 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 TRAK2O60296 914 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 NASPP49321 788 aaPredicted RBP15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 MRPS27Q92552 414 aaKnown RBP15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 MTA3Q9BTC8 594 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 CCDC94Q9BW85 323 aaPredicted RBP15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 DBNDD1Q9H9R9 158 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 RFX7Q2KHR2 1363 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 C19orf81C9J6K1 198 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 RPLP2P05387 115 aaKnown RBP15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 FAM47CQ5HY64 1035 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 SUSD4Q5VX71 490 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 FAM167AQ96KS9 214 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 ATP6V0A2Q9Y487 856 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 PLSCR1O15162 318 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 RAD17O75943 681 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 FAM177A1Q8N128 213 aaPredicted RBP15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 ALAS1P13196 640 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 FCHSD1Q86WN1 690 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 TRMT44Q8IYL2 757 aaKnown RBP15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 MAGEF1Q9HAY2 307 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 SCNN1DP51172 638 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 KIF11P52732 1056 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 GSE1Q14687 1217 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 IFNL3Q8IZI9 196 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 ABI1Q8IZP0 508 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
PRPF38A-201ENST00000257181 ARHGAP29Q52LW3 1261 aa15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 WDR11Q9BZH6 1224 aa15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 PUF60Q9UHX1 559 aaKnown RBP15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 JAG2Q9Y219 1238 aa15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 GAS7O60861 476 aa15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 ZSCAN22P10073 491 aaPredicted RBP15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 INO80BQ9C086 356 aaPredicted RBP15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 TRPC6Q9Y210 931 aa15.08■□□□□ 0.01
PRPF38A-201ENST00000257181 CFBP00751 764 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 BMP3P12645 472 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 CRKP46108 304 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 UBE2HP62256 183 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 SETQ01105 290 aaPredicted RBP15.08■□□□□ 0
PRPF38A-201ENST00000257181 MB21D1Q8N884 522 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 NAA15Q9BXJ9 866 aaKnown RBP15.08■□□□□ 0
PRPF38A-201ENST00000257181 HDLBPQ00341 1268 aaKnown RBP15.08■□□□□ 0
PRPF38A-201ENST00000257181 CDC42EP1Q00587 391 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 ZYXQ15942 572 aaKnown RBP15.08■□□□□ 0
PRPF38A-201ENST00000257181 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.08■□□□□ 0
PRPF38A-201ENST00000257181 ASB14A6NK59 587 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 SNAPC2Q13487 334 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 DEPTORQ8TB45 409 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 TSNARE1Q96NA8 513 aa15.08■□□□□ 0
PRPF38A-201ENST00000257181 KDM6AO15550 1401 aaPredicted RBP15.07■□□□□ 0
PRPF38A-201ENST00000257181 KRT24Q2M2I5 525 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 GBP3Q9H0R5 595 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 CETPP11597 493 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 STAT2P52630 851 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 SMC1AQ14683 1233 aaKnown RBP15.07■□□□□ 0
PRPF38A-201ENST00000257181 SF3B3Q15393 1217 aaKnown RBP15.07■□□□□ 0
PRPF38A-201ENST00000257181 PPP1R2P3Q6NXS1 205 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 ZNF526Q8TF50 670 aaPredicted RBP15.07■□□□□ 0
PRPF38A-201ENST00000257181 ZNF592Q92610 1267 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 ARID4AP29374 1257 aaPredicted RBP15.07■□□□□ 0
PRPF38A-201ENST00000257181 NFIXQ14938 502 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 FNBP4Q8N3X1 1017 aaPredicted RBP15.07■□□□□ 0
PRPF38A-201ENST00000257181 SNX21Q969T3 373 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 SPAG5Q96R06 1193 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 PSTPIP2Q9H939 334 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 B4E1Z4 1266 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 USP17L12C9JPN9 530 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 USP17L21D6R901 530 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 N4BP1O75113 896 aaKnown RBP15.07■□□□□ 0
PRPF38A-201ENST00000257181 GAS8O95995 478 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 PLEKHM2Q8IWE5 1019 aa15.07■□□□□ 0
PRPF38A-201ENST00000257181 RICTORQ6R327 1708 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 ENTPD3O75355 529 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 ZNF853P0CG23 659 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 NFKBIBQ15653 356 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 CEP128Q6ZU80 1094 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 SREK1Q8WXA9 508 aaKnown RBP15.06■□□□□ 0
PRPF38A-201ENST00000257181 NWD1Q149M9 1564 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 NRKQ7Z2Y5 1582 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 TNS2Q63HR2 1409 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 SPTLC2O15270 562 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 GNA14O95837 355 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 PPP1R18Q6NYC8 613 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 ISCA1Q9BUE6 129 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 LRRC7Q96NW7 1537 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 ZSCAN20P17040 1043 aaPredicted RBP15.06■□□□□ 0
PRPF38A-201ENST00000257181 CCDC24Q8N4L8 307 aa15.06■□□□□ 0
PRPF38A-201ENST00000257181 MARCKSP29966 332 aaPredicted RBP15.05■□□□□ 0
PRPF38A-201ENST00000257181 CALCRLQ16602 461 aa15.05■□□□□ 0
PRPF38A-201ENST00000257181 TDRD12Q587J7 1177 aaKnown RBP15.05■□□□□ 0
PRPF38A-201ENST00000257181 CCDC91Q7Z6B0 441 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms