RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 GABPB1Q06547 395 aaPredicted RBP15.33■□□□□ 0.04
VHL-201ENST00000256474 GUCA1BQ9UMX6 200 aa15.33■□□□□ 0.04
VHL-201ENST00000256474 ABL1P00519 1130 aa15.33■□□□□ 0.04
VHL-201ENST00000256474 CRKLP46109 303 aaKnown RBP15.33■□□□□ 0.04
VHL-201ENST00000256474 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
VHL-201ENST00000256474 TTC38Q5R3I4 469 aa15.33■□□□□ 0.04
VHL-201ENST00000256474 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.33■□□□□ 0.04
VHL-201ENST00000256474 OAS2P29728 719 aaKnown RBP15.32■□□□□ 0.04
VHL-201ENST00000256474 PAGE5Q96GU1 130 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 MED15Q96RN5 788 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 ZSCAN10Q96SZ4 725 aaPredicted RBP15.32■□□□□ 0.04
VHL-201ENST00000256474 PLA2G12BQ9BX93 195 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 PARD6BQ9BYG5 372 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 ARFGAP3Q9NP61 516 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 GNL3LQ9NVN8 582 aaKnown RBP15.32■□□□□ 0.04
VHL-201ENST00000256474 STX8Q9UNK0 236 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 PP2D1A8MPX8 630 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
VHL-201ENST00000256474 RAD9BQ6WBX8 426 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 FBXL16Q8N461 479 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 SUGCTQ9HAC7 445 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 GDAQ9Y2T3 454 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 SRPRBQ9Y5M8 271 aaKnown RBP15.32■□□□□ 0.04
VHL-201ENST00000256474 ENC1O14682 589 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 TADA3O75528 432 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 KLRK1P26718 216 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 PLCD1P51178 756 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 ANKRD18AQ8IVF6 992 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 CAPZA3Q96KX2 299 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 FOXP1Q9H334 677 aaPredicted RBP15.32■□□□□ 0.04
VHL-201ENST00000256474 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 LAMA4Q16363 1823 aa15.32■□□□□ 0.04
VHL-201ENST00000256474 RAD21O60216 631 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 ACTN4O43707 911 aaKnown RBP15.31■□□□□ 0.04
VHL-201ENST00000256474 LMAN1P49257 510 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 CUL4BQ13620 913 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 FKBP15Q5T1M5 1219 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 TRIM49BA6NDI0 452 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 PLA2G4AP47712 749 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 ST5P78524 1137 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 MORC3Q14149 939 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 ENOX1Q8TC92 643 aaKnown RBP15.31■□□□□ 0.04
VHL-201ENST00000256474 MCM9Q9NXL9 1143 aa15.31■□□□□ 0.04
VHL-201ENST00000256474 STX10O60499 249 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
VHL-201ENST00000256474 FAM193AP78312 1265 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 UBXN1Q04323 297 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 SLC35F6Q8N357 371 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 TMTC2Q8N394 836 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 CCDC102AQ96A19 550 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 PHLPP2Q6ZVD8 1323 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 H2AFXP16104 143 aaPredicted RBP15.3■□□□□ 0.04
VHL-201ENST00000256474 MDM2Q00987 491 aaPredicted RBP15.3■□□□□ 0.04
VHL-201ENST00000256474 CCDC93Q567U6 631 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 DRC1Q96MC2 740 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 TRIM10Q9UDY6 481 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 CDHR2Q9BYE9 1310 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 ABCC12Q96J65 1359 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 DNA2P51530 1060 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 ERFEQ4G0M1 354 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
VHL-201ENST00000256474 GNAT2P19087 354 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 KANK3Q6NY19 840 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 HEATR3Q7Z4Q2 680 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 GOLGA1Q92805 767 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 SHISA4Q96DD7 197 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 EFCAB8A8MWE9 144 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 KCNQ2O43526 872 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 FGFR2P21802 821 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 PRDX5P30044 214 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 KRT9P35527 623 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 DPYDQ12882 1025 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
VHL-201ENST00000256474 JAKMIP3Q5VZ66 844 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
VHL-201ENST00000256474 STAT6P42226 847 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 TNNT3P45378 269 aaPredicted RBP15.29■□□□□ 0.04
VHL-201ENST00000256474 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 SPATA1Q5VX52 437 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 SLC51AQ86UW1 340 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 TMEM139Q8IV31 216 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 GPR101Q96P66 508 aaPredicted RBP15.29■□□□□ 0.04
VHL-201ENST00000256474 WDR19Q8NEZ3 1342 aa15.29■□□□□ 0.04
VHL-201ENST00000256474 ZMYND10O75800 440 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 SASH3O75995 380 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 IL6STP40189 918 aaPredicted RBP15.28■□□□□ 0.04
VHL-201ENST00000256474 USP5P45974 858 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 MRPS25P82663 173 aaKnown RBP15.28■□□□□ 0.04
VHL-201ENST00000256474 TSR1Q2NL82 804 aaKnown RBP15.28■□□□□ 0.04
VHL-201ENST00000256474 NELFBQ8WX92 580 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 CELF1Q92879 486 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms