RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 TACC3Q9Y6A5 838 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 ARFGEF2Q9Y6D5 1785 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 ADGRA1Q86SQ6 560 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 AMOTL1Q8IY63 956 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 FHOD1Q9Y613 1164 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 RBL2Q08999 1139 aa20.91■□□□□ 0.94
LRP3-201ENST00000253193 KAT14Q9H8E8 782 aa20.91■□□□□ 0.94
LRP3-201ENST00000253193 CCDC194A0A1B0GVG4 234 aa20.91■□□□□ 0.94
LRP3-201ENST00000253193 PHLPP2Q6ZVD8 1323 aa20.91■□□□□ 0.94
LRP3-201ENST00000253193 TAB2Q9NYJ8 693 aa20.91■□□□□ 0.94
LRP3-201ENST00000253193 HSD3B7Q9H2F3 369 aa20.91■□□□□ 0.94
LRP3-201ENST00000253193 ARFGAP3Q9NP61 516 aa20.91■□□□□ 0.94
LRP3-201ENST00000253193 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
LRP3-201ENST00000253193 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
LRP3-201ENST00000253193 PAGE5Q96GU1 130 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 CTAGE1Q96RT6 745 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 L2HGDHQ9H9P8 463 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 H2AFXP16104 143 aaPredicted RBP20.9■□□□□ 0.94
LRP3-201ENST00000253193 STAT6P42226 847 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 ZCCHC17Q9NP64 241 aaKnown RBP20.9■□□□□ 0.94
LRP3-201ENST00000253193 FAM53CQ9NYF3 392 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 KIF1AQ12756 1690 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 MYO1BO43795 1136 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 BMP15O95972 392 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 CASP14P31944 242 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 CCDC93Q567U6 631 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 SPATA1Q5VX52 437 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 TRIML1Q8N9V2 468 aa20.9■□□□□ 0.94
LRP3-201ENST00000253193 MORC3Q14149 939 aa20.89■□□□□ 0.94
LRP3-201ENST00000253193 NOM1Q5C9Z4 860 aaKnown RBP20.89■□□□□ 0.94
LRP3-201ENST00000253193 RBM28Q9NW13 759 aaKnown RBP20.89■□□□□ 0.94
LRP3-201ENST00000253193 MAGEC2Q9UBF1 373 aaPredicted RBP20.89■□□□□ 0.94
LRP3-201ENST00000253193 PHRF1Q9P1Y6 1649 aaKnown RBP20.89■□□□□ 0.93
LRP3-201ENST00000253193 CALM1P0DP23 149 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 CALM2P0DP24 149 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 CALM3P0DP25 149 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 MCM6Q14566 821 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 REXO1L1PQ8IX06 675 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 GPKOWQ92917 476 aaPredicted RBP eCLIP20.89■□□□□ 0.93
LRP3-201ENST00000253193 IPO7O95373 1038 aaKnown RBP20.89■□□□□ 0.93
LRP3-201ENST00000253193 PNMA6AP0CW24 399 aaPredicted RBP20.89■□□□□ 0.93
LRP3-201ENST00000253193 UBA7P41226 1012 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 PLA2G4AP47712 749 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 VAT1LQ9HCJ6 419 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 ANKIB1Q9P2G1 1089 aa20.89■□□□□ 0.93
LRP3-201ENST00000253193 CCDC66A2RUB6 948 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 EIF5P55010 431 aaKnown RBP20.88■□□□□ 0.93
LRP3-201ENST00000253193 EARS2Q5JPH6 523 aaKnown RBP20.88■□□□□ 0.93
LRP3-201ENST00000253193 TC2NQ8N9U0 490 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 FERMT2Q96AC1 680 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 EFCAB8A8MWE9 144 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 HEATR3Q7Z4Q2 680 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 BBXQ8WY36 941 aaPredicted RBP20.88■□□□□ 0.93
LRP3-201ENST00000253193 GOLGA1Q92805 767 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 INTS13Q9NVM9 706 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 LAMA4Q16363 1823 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 VGLL3A8MV65 326 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 UBXN1Q04323 297 aa20.88■□□□□ 0.93
LRP3-201ENST00000253193 RHOXF2BP0C7M4 288 aa20.87■□□□□ 0.93
LRP3-201ENST00000253193 ERCC5P28715 1186 aaPredicted RBP20.87■□□□□ 0.93
LRP3-201ENST00000253193 KIF5BP33176 963 aa20.87■□□□□ 0.93
LRP3-201ENST00000253193 RHOXF2Q9BQY4 288 aa20.87■□□□□ 0.93
LRP3-201ENST00000253193 NBPF5PQ86XG9 351 aaPredicted RBP20.87■□□□□ 0.93
LRP3-201ENST00000253193 ACTN4O43707 911 aaKnown RBP20.87■□□□□ 0.93
LRP3-201ENST00000253193 CYP2D6P10635 497 aa20.87■□□□□ 0.93
LRP3-201ENST00000253193 PNPLA7Q6ZV29 1317 aa20.87■□□□□ 0.93
LRP3-201ENST00000253193 PPP2R5BQ15173 497 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 JAKMIP3Q5VZ66 844 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 TRIM65Q6PJ69 517 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 ZNF579Q8NAF0 562 aaKnown RBP20.86■□□□□ 0.93
LRP3-201ENST00000253193 DCCP43146 1447 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 RAD21O60216 631 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 KCNJ6P48051 423 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 GPS2Q13227 327 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 STIM1Q13586 685 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 FCHSD1Q86WN1 690 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 ZNF444Q8N0Y2 327 aaPredicted RBP20.86■□□□□ 0.93
LRP3-201ENST00000253193 NLRP3Q96P20 1036 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 GUCA1BQ9UMX6 200 aa20.86■□□□□ 0.93
LRP3-201ENST00000253193 HIBADHP31937 336 aaKnown RBP20.85■□□□□ 0.93
LRP3-201ENST00000253193 CNGA4Q8IV77 575 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 TRIM47Q96LD4 638 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 SLF1Q9BQI6 1058 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 TRPM3Q9HCF6 1732 aaPredicted RBP20.85■□□□□ 0.93
LRP3-201ENST00000253193 MDM2Q00987 491 aaPredicted RBP20.85■□□□□ 0.93
LRP3-201ENST00000253193 NEK11Q8NG66 645 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 NELFBQ8WX92 580 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 PARP3Q9Y6F1 533 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 PRPF3O43395 683 aaKnown RBP20.85■□□□□ 0.93
LRP3-201ENST00000253193 KRT9P35527 623 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 CHMP4BP1P59074 171 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 TFAP4Q01664 338 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 CCDC47Q96A33 483 aaKnown RBP20.85■□□□□ 0.93
LRP3-201ENST00000253193 KCPQ6ZWJ8 1503 aa20.85■□□□□ 0.93
LRP3-201ENST00000253193 SIPA1L3O60292 1781 aaPredicted RBP20.85■□□□□ 0.93
LRP3-201ENST00000253193 CTAGE9A4FU28 777 aa20.84■□□□□ 0.93
LRP3-201ENST00000253193 MARCH6O60337 910 aa20.84■□□□□ 0.93
LRP3-201ENST00000253193 SCG2P13521 617 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms