RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 ERVK-24P63145 666 aa15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 SLC9C2Q5TAH2 1124 aa15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 NECAB2Q7Z6G3 386 aa15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 PAWRQ96IZ0 340 aaKnown RBP15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 RIOK1Q9BRS2 568 aaKnown RBP15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 PAGR1Q9BTK6 254 aa15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 CRNKL1Q9BZJ0 848 aaKnown RBP15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 BRCA2P51587 3418 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L15C9J2P7 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L13C9JLJ4 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L11C9JVI0 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L18D6R9N7 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L22D6RA61 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L17D6RBQ6 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L19D6RCP7 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L20D6RJB6 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 APBB1O00213 710 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 XRCC5P13010 732 aaKnown RBP15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP17L24Q0WX57 530 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 ZYXQ15942 572 aaKnown RBP15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 TRIB2Q92519 343 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 DNAJC2Q99543 621 aaKnown RBP15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 KIAA1683Q9H0B3 1180 aa15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 RBM27Q9P2N5 1060 aaKnown RBP15.64■□□□□ 0.09
APOBEC3A-201ENST00000249116 RAB11FIP3O75154 756 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 PDE6AP16499 860 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 RGS2P41220 211 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 CCNA1P78396 465 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 TRIM32Q13049 653 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 Q3C1V9 767 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 GPR142Q7Z601 462 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 PLEKHH3Q7Z736 793 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 RABGAP1Q9Y3P9 1069 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 MYH1P12882 1939 aa15.63■□□□□ 0.09
APOBEC3A-201ENST00000249116 GOLIM4O00461 696 aa15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 PEX10O60683 326 aa15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 GLRX3O76003 335 aaKnown RBP15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 ZKSCAN1P17029 563 aaPredicted RBP15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 PLCD1P51178 756 aa15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 PORCNQ9H237 461 aa15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 MCM9Q9NXL9 1143 aa15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 COG6Q9Y2V7 657 aa15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 ZNF532Q9HCE3 1301 aa15.62■□□□□ 0.09
APOBEC3A-201ENST00000249116 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 SHMT1P34896 483 aa15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 MAP3K21Q5TCX8 1036 aa15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 CATSPERGQ6ZRH7 1159 aa15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 DIS3LQ8TF46 1054 aaKnown RBP15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 NBPF3Q9H094 633 aa15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 BCL11AQ9H165 835 aa15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 ZBTB40Q9NUA8 1239 aa15.61■□□□□ 0.09
APOBEC3A-201ENST00000249116 VCAM1P19320 739 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 MORN1Q5T089 497 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 ACER1Q8TDN7 264 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 USP6NLQ92738 828 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 APBA2Q99767 749 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 OGDHLQ9ULD0 1010 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 DOCK3Q8IZD9 2030 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 MPHOSPH10O00566 681 aaKnown RBP15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 GABPAQ06546 454 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 WDR78Q5VTH9 848 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 LBX2Q6XYB7 198 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 SIRT2Q8IXJ6 389 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 PRO3102Q9H379 93 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 C11orf49Q9H6J7 331 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 RPAP3Q9H6T3 665 aaPredicted RBP15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 DCP1AQ9NPI6 582 aaPredicted RBP15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 PAG1Q9NWQ8 432 aa15.6■□□□□ 0.09
APOBEC3A-201ENST00000249116 PLXNB2O15031 1838 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 A0A1W2PPC1 479 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 TCRBV5S4A2TA0A5A2 114 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 CNMDO75829 334 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 GUCY1A2P33402 732 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 CACNB2Q08289 660 aaPredicted RBP15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 MAP2K5Q13163 448 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 SEPT2Q15019 361 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 LCORLQ8N3X6 602 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 SDR42E1Q8WUS8 393 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 EDC3Q96F86 508 aaKnown RBP15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 SWAP70Q9UH65 585 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 IVNS1ABPQ9Y6Y0 642 aa15.59■□□□□ 0.09
APOBEC3A-201ENST00000249116 SLC15A5A6NIM6 579 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 ATP5JP18859 108 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 CCL14Q16627 93 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 TMEM179Q6ZVK1 233 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 AMOTL1Q8IY63 956 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 C7orf61Q8IZ16 206 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 BOLA2Q9H3K6 86 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 ARMT1Q9H993 441 aa15.58■□□□□ 0.08
APOBEC3A-201ENST00000249116 DDX60LQ5H9U9 1706 aaKnown RBP15.57■□□□□ 0.08
APOBEC3A-201ENST00000249116 NAV1Q8NEY1 1877 aa15.57■□□□□ 0.08
APOBEC3A-201ENST00000249116 SPDYE16A6NNV3 312 aaPredicted RBP15.57■□□□□ 0.08
APOBEC3A-201ENST00000249116 PTPREP23469 700 aa15.57■□□□□ 0.08
APOBEC3A-201ENST00000249116 ADD2P35612 726 aa15.57■□□□□ 0.08
APOBEC3A-201ENST00000249116 MFSD14CQ5VZR4 134 aa15.57■□□□□ 0.08
APOBEC3A-201ENST00000249116 DDRGK1Q96HY6 314 aa15.57■□□□□ 0.08
APOBEC3A-201ENST00000249116 ATP8A2Q9NTI2 1148 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms